Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq425 127 6e-24 seq541 120 9e-22 seq142 116 1e-20 seq62 116 1e-20 >seq425 Length=119061 Score = 127 bits (140), Expect = 6e-24 Identities = 521/808 (64%), Gaps = 25/808 (3%) Strand=Plus/Minus Query 133104 AGATTTGGCAGATGTATAAAAAACAGCAAGATTTATTTTGGACTTCAACTGAAGTAGATT 133163 |||| |||||||||||||| || | | | || |||||| | || | ||| Sbjct 46130 AGATCTGGCAGATGTATAAGAAGGCTGAGGCCTCGTTCTGGACTGCTGAGGAGATTGATC 46071 Query 133164 TATCCAAAGACCCAGCCCACTGGGA-AGCC--CTTACTGGGGATGAAAAACATTTTATTT 133220 |||||||||| | | ||||| | | || ||||| ||| || | | || || | Sbjct 46070 TATCCAAAGATCTCCACGACTGGAACAACCGGCTTACCAAGGACGAGCAGTACTTCATCT 46011 Query 133221 CTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAGGAACAC 133280 || ||| | || || |||||||| |||||| ||||| || || | || | Sbjct 46010 CTCACATTCTGGCCTTCTTTGCTGCCTCTGATGGCATTGTCAACGAGAACCT-GGTTGAG 45952 Query 133281 GGTTTATG-GGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCG 133339 |||| | || || || || | | || || ||| ||| ||||| | ||||| | Sbjct 45951 CGTTTCTCTGGCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTATGGTTTCCAGATCATG 45892 Query 133340 ATGGAAAATATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACC 133399 ||||| || ||||| || || || ||| | || |||||||| ||||| || | Sbjct 45891 ATGGAGAACATCCACTCCGAGACCTACTCTTTGTTGATCGATACTTATATCAAGGAGCCT 45832 Query 133400 GTCCAGAAGCACAAAC-TATTCAACGCCATTAGCGAATTTCCTTGTATTAAAAAGAAATC 133458 | |||| |||| || | |||||||| ||| | |||| || || ||| | Sbjct 45831 GCCCAGC-GCACGTACCTGTTCAACGCTATTGACACCATTCCCTGCATACGCCGCAAAGC 45773 Query 133459 TGACTGGGCTATTAAATGGATCCAGGACA-AGCGTGCGAGTTTTGCTACTCGTCTCGTTG 133517 ||||||||| | ||||||||| |||| || | | | ||||||| || || | | Sbjct 45772 CGACTGGGCTCTCAAATGGATCTGCGACAGAGAAT-CAACTTTTGCTCAGCGCCTAATCG 45714 Query 133518 CTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTA 133577 ||||||||| || |||||||| || || ||| || || |||||| |||||||| Sbjct 45713 CTTTTGCTGCCGTCGAGGGCATCTTCTTTTCTGGAGCCTTTGCCTCTATCTTTTGGCTGC 45654 Query 133578 AAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGG 133637 ||||||||| | | || || ||| ||||||||||| || ||||| | || |||| Sbjct 45653 GCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCCCGTGATGAGG 45594 Query 133638 CACTTCACACCGAATTTGCCGTTTTACTTCACTCTAAATTAGAGCGAC--CACTCAAAAA 133695 || ||||| || |||||| || | ||| | | || | || | || || Sbjct 45593 GTCTGCACACTGACTTTGCCTGCCTATTGTTCTCCCACCT-GAACAACCGCCCTGGCAAG 45535 Query 133696 GAATAAGATTGAAGAAATTATTAGAGAAGCGGTTGAAATTGAGGTTGAATTTATCAATAG 133755 ||| | |||| |||| || | || || || | |||||| || || | | | Sbjct 45534 GAACTTG-TTGAGCAAATCATCACCGACGCCGTCGTCATTGAGAAGGAGTTCCTGACTGA 45476 Query 133756 TGCTCTGCCGTGCCGTTTAATTGGTATGAATGATGTGCTGATGCAGCGTTATATTGAATT 133815 ||||| || ||| ||||| | || ||||| | || |||||| ||| |||||||| || Sbjct 45475 GGCTCTTCCTTGCGGTTTACTCGGCATGAACGCTGACCTGATGAAGCAGTATATTGAGTT 45416 Query 133816 TGTAGCTGACAG------ATTGGCCGTTCAGTTAGGTGGGGATAAGATTTACGGTTCCGC 133869 || || ||| | | ||||| || || || ||| | ||| || | | Sbjct 45415 CGTTGCCGACCGTCTCTTAGTGGCCCTT------GGCAACGACAAGGTGTACCGTGCTAC 45362 Query 133870 CAATCCATTCGACTGGATGGAGAGCATT 133897 ||| || ||||||| ||||||| |||| Sbjct 45361 CAACCCCTTCGACTTCATGGAGAACATT 45334 >seq541 Length=36825 Score = 120 bits (132), Expect = 9e-22 Identities = 192/273 (70%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||| | | ||||| || |||||| ||||| || |||||| | || || ||||| Sbjct 10351 TCTTCAAGAGCCTTGACTAGACGACGTTGAATGTATCCAGTTTCGGCAGTCTTGACAGCA 10410 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTA-G 302690 |||||||| | ||| |||||||| |||| || |||||||| | ||| || |||| | Sbjct 10411 GTATCAATCAAACCTTCACGACCAGCCATGGCGTGGAAGAAGAACTCGCTTGG-CGTAAG 10469 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | || | ||| | || ||||| ||||| | |||||| |||| || ||||| Sbjct 10470 ACCACGAAGGTAAGAGTTTTCGACGAAGCCACGTGACTCGGGAGAATAATCATCTTTGGT 10529 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| || || || | || || | || | || ||||||||||| || ||| | || Sbjct 10530 GAAGTGAGGAAGCGTACGGTACTTGAATCCAAAGGGAATACGCTTTCCTTCGACGATTTG 10589 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || || | | | | ||||||| |||||||| Sbjct 10590 TTGACCGACCAAGGCAGTCATCTGGGAAATATT 10622 >seq142 Length=98154 Score = 116 bits (128), Expect = 1e-20 Identities = 482/754 (64%), Gaps = 15/754 (2%) Strand=Plus/Minus Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685 ||| ||| || | ||||| ||||||||| || || || ||||| | ||||||| Sbjct 2978 CGCAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGAATAGTGCCCAGGTTCTTCT 2919 Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745 |||| || ||||| || ||||||||||| || ||| | ||| |||| ||||| | | Sbjct 2918 GGTTGCTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTT 2859 Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTT 155805 | || || || || ||| || | |||| || || | | ||| | Sbjct 2858 GGGCCTCAAGGATGGCGTACCATAGCTTCTGGGCCTTGATGGTGAGGCGACCGCGGCCCT 2799 Query 155806 CCGACTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCC 155863 | ||| || |||| || | ||| | | | || |||||||| || || ||| || Sbjct 2798 CGCTCTCGTACTTTTCGTACAGAGCCTC--GAACTCGTCACCGTAGCAGTCGGCCAGACC 2741 Query 155864 AGGGCACTTATCGGGGCAAAACAGCGACCAAATT---TTATTACCGATTACACGCTCCAT 155920 ||||||| | |||||| | || | ||| | || || ||| |||||| ||| Sbjct 2740 GGGGCACTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGA---CACGCTTCAT 2684 Query 155921 AAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC 155980 || | || ||| | || ||| ||||| | || |||||| | ||| Sbjct 2683 GAACAGGTCGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCC 2624 Query 155981 GTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACAT 156040 ||| ||||| ||||| || | ||| || | ||| | ||| ||||| || || || Sbjct 2623 GTGGTTCTTGCGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGAT 2564 Query 156041 AGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAA 156097 |||||| ||| | |||| |||||||| || ||||| || || || || ||||| Sbjct 2563 AGCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAA 2504 Query 156098 GACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACC 156157 ||| | |||||||| | || || || || ||||| || || || ||| | ||| || Sbjct 2503 GACGCGCAGCATAGGCACGATGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAGCC 2444 Query 156158 AGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAG 156216 | | ||| | | || | | || ||||||||||| | |||| || || || || Sbjct 2443 GGTGGCGCGGATACGGTGGACGTTCAGGCCAATACCACC-GGCCATCTTGGAGATCATAG 2385 Query 156217 CGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGAT 156276 | || ||| | |||| | | ||||| ||||| ||||| | ||| | | Sbjct 2384 CACAAGTCTTCAGCGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGACCAAGA 2325 Query 156277 AGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAA 156336 |||| || || || | | || || ||||||||||| || ||||||| || || Sbjct 2324 AGCATGACGATAGCTGGGCCTGCGGCGTGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTG 2265 Query 156337 TAAAATACTTATTAGACATATAATCGTATGTCTC 156370 | ||| |||| | ||||| || | ||| ||||| Sbjct 2264 TGAAAAGCTTACTGGACATGTAGTTGTACGTCTC 2231 >seq62 Length=154220 Score = 116 bits (128), Expect = 1e-20 Identities = 390/594 (66%), Gaps = 26/594 (4%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 ||||||||||| | | || | |||||| | | ||||||| || | ||| | | || Sbjct 24342 ATAAGACCACAGATCTCGCAGATATGGACACGGAAAGCATCCGAAACTTCAAACAAACGC 24283 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| || |||||||| | |||||| |||||||| |||||||| |||||| Sbjct 24282 TCCTTCAGGAACGCAGCGGCACCGTGGGCAATCATGCAATCACGTTCCATTTCTCCGAAA 24223 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGA-GATTAACCATAGG 251585 || ||||||||||| || || | ||| || | ||||| ||||| | |||| | || Sbjct 24222 CGCAGACCACCATCACGGGCACGACCTTCCACGGGCTGGCGAGTCATGATT-TGTACGGG 24164 Query 251586 ACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGC 251645 ||| || ||| || ||| || | ||||| || ||||| |||||| | | Sbjct 24163 ACCACGGGCACGGGCGTGGATCTTGTCGTCCACCATGTGACGCAGACGTTGGTAGTAGGT 24104 Query 251646 GGGACCGATGAAGATGCTCGAAGGCATTTGCTCTCCAGTTAGAG----CGTTATACATAA 251701 ||||||| ||||| || | ||| ||| | | | ||| ||| |||| | Sbjct 24103 AGGACCGAAGAAGACTTGCGCACGCA---GCT-TACGGCCTGAGTGGCCGTGGTACACAC 24048 Query 251702 CTTCGTTTCCATTAGATTCATAACCAAGTTTCTGTAGCTCTGAAGCAATATCACC-AATC 251760 || ||| || | || ||| | | ||||| ||| | |||| |||| Sbjct 24047 TCTCAAAACCACGCGACTGGTAGCCATGCTGGCGTAGC-----AGCGCTGACACCGAATC 23993 Query 251761 ----TTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTT 251816 ||| | | || |||| | || || | | |||| || | | ||| || Sbjct 23992 GACAGTGACATCAGTGAATGGGGTGGCATCACCCTCCATACCCTTTAGCGTGGCCACCTT 23933 Query 251817 GCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATT 251876 | ||||| ||| ||| ||||| || ||||||||| |||||||| || || || Sbjct 23932 ACTCAAAAGACACTCAATCAAATGGGCAATGGTCATACGAGAAGGAATAGCGTGAGGGTT 23873 Query 251877 GATGATGATGTCGGGTTTCAGTCCATCAGCA-GTGAAGGGCATATCCTTTTCCTCAATAA 251935 ||| || |||||||| | | || || ||| ||||| ||||||| ||| | | |||| Sbjct 23872 GATAATAATGTCGGGAGTGATGCCCTC-GCAGGTGAACGGCATAT-CTTCTTGGCGATAA 23815 Query 251936 TGTT--TCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||| ||||| || ||||| ||||| |||||||| |||||||||||||| Sbjct 23814 -GTTACACCAATGGTACCCTTCTGTCCATGACGAGACGCAAACTTATCACCAAT 23762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471800382953681