Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq447 178 2e-38 seq286 134 2e-25 seq142 113 6e-19 seq91 98.7 1e-14 seq425 96.9 4e-14 >seq447 Length=22263 Score = 178 bits (196), Expect = 2e-38 Identities = 275/393 (70%), Gaps = 6/393 (2%) Strand=Plus/Plus Query 18096 CTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCAT 18155 |||||| || |||||||| || || || |||||||||||| | |||||| | || Sbjct 2276 CTTTGGTGAATCGCACGGCAAGGCTGTGGGTTGCATCATCGACAACCCCCCGCCGGGTAT 2335 Query 18156 GCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGC 18215 | | ||| |||| ||||| || ||||||||| || |||||||| || |||||| || | Sbjct 2336 GGCCCTGACCGAAGCCGATATACAGCCTCAGCTGACCCGGCGCCGGCCCGGCCAGAGCTC 2395 Query 18216 ACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGG 18275 | | ||||| |||||||| || || || | ||||| ||||||| ||| |||| Sbjct 2396 TATCACTACGCCACGCAACGAAAAGGACCGTGTGACCATCCTGTCGGGCTGCGAGGACGG 2455 Query 18276 CCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGA 18335 || || || ||| | || | | ||| || || |||||||| ||| || Sbjct 2456 CCGTACACTGGGCACTCCGATTGCCCTAACCGTTAATAATGAAGACCAGCGTCCCAGAGA 2515 Query 18336 CTATTCCGA------CATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCTACAT 18389 || | | |||| |||| | || || || || || ||||||| ||||||| Sbjct 2516 TTACGGCAACCAGACCATGGACAAGTTCCCCCGCCCTTCGCATGCCGACTTCACCTACCA 2575 Query 18390 GGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCT 18449 || ||||||||||||||||||||||||||||| ||||| ||| |||||||| | Sbjct 2576 GGAAAAGTACGGCATCAAGGCGTCGTCGGGCGGTGGCCGAAGCAGTGCGCGCGAGACTAT 2635 Query 18450 CATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 ||||| || || |||||||| |||||||| Sbjct 2636 TGCCCGCGTAGCTGCTGGCGCGGTAGCCGAGAA 2668 >seq286 Length=39364 Score = 134 bits (148), Expect = 2e-25 Identities = 94/107 (88%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||| ||||||| ||||| ||||||||| |||| ||| |||| |||||| | || || ||| Sbjct 1345 GCCTCCAACTATCTCGATATCAAGCCTTTGCTGGATGTTGGCTGCAAGACCGTCGCAAAC 1404 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292 ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 1405 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGCAAGACCTTCAACAT 1451 >seq142 Length=98154 Score = 113 bits (124), Expect = 6e-19 Identities = 329/508 (65%), Gaps = 12/508 (2%) Strand=Plus/Minus Query 1628099 CGACAAACTTGGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTC--CGTGGGCGA 1628156 |||||||| || ||||||| || |||||||| || ||||| | ||||| Sbjct 3035 CGACAAACGACGGTAGGGCCAGCGAGGCCAGGTTGCACACAGCAACTTCATCAGGGGCGC 2976 Query 1628157 CGAAAACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCT 1628215 | | || || |||||||||||||||||||| | || | || |||||||||| || Sbjct 2975 AGTA--CTCGATGATCTCGGTGCACAGGTTGGAGCTGCGAA-TAGTGCCCAGGTTCTTCT 2919 Query 1628216 GGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCT 1628275 ||||| | || |||| ||| ||||||| |||||| | || ||||||||| | | Sbjct 2918 GGTTGCTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTT 2859 Query 1628276 GCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCG-CG--CGCGGC 1628332 | ||| | | |||||| |||| | || | || | || || | || |||||| Sbjct 2858 GGGCCTCAAGGATGGCGTACCATAGCTTCTGGGC---CTTGATGGTGAGGCGACCGCGGC 2802 Query 1628333 CCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGC 1628392 ||| || || | | |||||||| ||| ||| | Sbjct 2801 CCTCGCTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCGGCCAGAC 2742 Query 1628393 CGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAA 1628452 |||| |||| || || | ||| | ||||| | | || | | || ||| | Sbjct 2741 CGGGGCACTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGA 2682 Query 1628453 AGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGT 1628512 | ||||| ||||||| || || |||||||| || || ||||||||||||||| Sbjct 2681 ACAGGTCGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGT 2622 Query 1628513 GGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGG 1628572 ||||||| |||||||| | |||| | ||||| ||||||||||| |||||| | Sbjct 2621 GGTTCTTGCGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAG 2562 Query 1628573 CAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 ||||||| || ||||||| ||| || Sbjct 2561 CAAAGGCTCCAGGGCGCTTGTTGCCACC 2534 Score = 98.7 bits (108), Expect = 1e-14 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 1627870 TCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGGCC 1627929 ||||| || ||||| || || || || || || |||||||||| || || | ||| Sbjct 3201 TCGGCTAGACCCTGAACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGCC 3142 Query 1627930 TCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACCTGG 1627989 |||||||| || || | |||| |||||| | |||||| ||||||| ||| ||||||| | Sbjct 3141 TCGGGCACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTTG 3082 Query 1627990 ACGATCTCGTGCAG 1628003 |||||||||||| Sbjct 3081 GTGATCTCGTGCAG 3068 >seq91 Length=92559 Score = 98.7 bits (108), Expect = 1e-14 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 1574065 CCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGC 1574124 |||| ||||| ||| | |||||||||||||| ||||||| | || || | ||||||| Sbjct 52436 CCGGCCGCCATAAGCTTATCATCCTCGACGAAGCCGACTCTATGACTTCTGGTGCCCAGC 52495 Query 1574125 AGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCA 1574184 | ||||| || || ||||||| || |||| || || |||||||| | || |||| Sbjct 52496 AAGCCCTTCGTCGTACGATGGAAATATACTCCAATACTACCCGCTTTGCATTTGCCTGCA 52555 Query 1574185 ACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTTGTGC 1574244 | ||| | | |||||||| |||| ||| || ||||| || |||||| || || Sbjct 52556 ATCAGTCTAACAAGATCATCGAGCCCCTACAATCGCGTTGCGCTATCTTGCGCTATGCGC 52615 Query 1574245 GCCTGGGTGACG 1574256 | || ||||| Sbjct 52616 GTCTTACTGACG 52627 >seq425 Length=119061 Score = 96.9 bits (106), Expect = 4e-14 Identities = 171/247 (69%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || || |||||||||||||||||||||| | || || || Sbjct 45278 GCCTTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATG 45337 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | ||| ||| ||| || || | | | Sbjct 45338 TTCTCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGTTGCCAAGGGCCACT 45397 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA-T 868869 | || |||||||| || ||||| || ||||| ||| ||| | ||||||||||||| | Sbjct 45398 AAGAGACGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCCGAGT 45457 Query 868870 GAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 | | || || || | ||| ||| ||||| ||||| || ||||||| ||| ||| Sbjct 45458 AAACCGCA-AGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGAT 45516 Query 868930 GATCTGC 868936 ||| ||| Sbjct 45517 GATTTGC 45523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107064274944421