Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq447 178 2e-38
seq286 134 2e-25
seq142 113 6e-19
seq91 98.7 1e-14
seq425 96.9 4e-14
>seq447
Length=22263
Score = 178 bits (196), Expect = 2e-38
Identities = 275/393 (70%), Gaps = 6/393 (2%)
Strand=Plus/Plus
Query 18096 CTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCAT 18155
|||||| || |||||||| || || || |||||||||||| | |||||| | ||
Sbjct 2276 CTTTGGTGAATCGCACGGCAAGGCTGTGGGTTGCATCATCGACAACCCCCCGCCGGGTAT 2335
Query 18156 GCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGC 18215
| | ||| |||| ||||| || ||||||||| || |||||||| || |||||| || |
Sbjct 2336 GGCCCTGACCGAAGCCGATATACAGCCTCAGCTGACCCGGCGCCGGCCCGGCCAGAGCTC 2395
Query 18216 ACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGG 18275
| | ||||| |||||||| || || || | ||||| ||||||| ||| ||||
Sbjct 2396 TATCACTACGCCACGCAACGAAAAGGACCGTGTGACCATCCTGTCGGGCTGCGAGGACGG 2455
Query 18276 CCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGA 18335
|| || || ||| | || | | ||| || || |||||||| ||| ||
Sbjct 2456 CCGTACACTGGGCACTCCGATTGCCCTAACCGTTAATAATGAAGACCAGCGTCCCAGAGA 2515
Query 18336 CTATTCCGA------CATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCTACAT 18389
|| | | |||| |||| | || || || || || ||||||| |||||||
Sbjct 2516 TTACGGCAACCAGACCATGGACAAGTTCCCCCGCCCTTCGCATGCCGACTTCACCTACCA 2575
Query 18390 GGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCT 18449
|| ||||||||||||||||||||||||||||| ||||| ||| |||||||| |
Sbjct 2576 GGAAAAGTACGGCATCAAGGCGTCGTCGGGCGGTGGCCGAAGCAGTGCGCGCGAGACTAT 2635
Query 18450 CATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482
||||| || || |||||||| ||||||||
Sbjct 2636 TGCCCGCGTAGCTGCTGGCGCGGTAGCCGAGAA 2668
>seq286
Length=39364
Score = 134 bits (148), Expect = 2e-25
Identities = 94/107 (88%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||| ||||||| ||||| ||||||||| |||| ||| |||| |||||| | || || |||
Sbjct 1345 GCCTCCAACTATCTCGATATCAAGCCTTTGCTGGATGTTGGCTGCAAGACCGTCGCAAAC 1404
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292
||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1405 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGCAAGACCTTCAACAT 1451
>seq142
Length=98154
Score = 113 bits (124), Expect = 6e-19
Identities = 329/508 (65%), Gaps = 12/508 (2%)
Strand=Plus/Minus
Query 1628099 CGACAAACTTGGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTC--CGTGGGCGA 1628156
|||||||| || ||||||| || |||||||| || ||||| | |||||
Sbjct 3035 CGACAAACGACGGTAGGGCCAGCGAGGCCAGGTTGCACACAGCAACTTCATCAGGGGCGC 2976
Query 1628157 CGAAAACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCT 1628215
| | || || |||||||||||||||||||| | || | || |||||||||| ||
Sbjct 2975 AGTA--CTCGATGATCTCGGTGCACAGGTTGGAGCTGCGAA-TAGTGCCCAGGTTCTTCT 2919
Query 1628216 GGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCT 1628275
||||| | || |||| ||| ||||||| |||||| | || ||||||||| | |
Sbjct 2918 GGTTGCTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTT 2859
Query 1628276 GCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCG-CG--CGCGGC 1628332
| ||| | | |||||| |||| | || | || | || || | || ||||||
Sbjct 2858 GGGCCTCAAGGATGGCGTACCATAGCTTCTGGGC---CTTGATGGTGAGGCGACCGCGGC 2802
Query 1628333 CCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGC 1628392
||| || || | | |||||||| ||| ||| |
Sbjct 2801 CCTCGCTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCGGCCAGAC 2742
Query 1628393 CGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAA 1628452
|||| |||| || || | ||| | ||||| | | || | | || ||| |
Sbjct 2741 CGGGGCACTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGA 2682
Query 1628453 AGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGT 1628512
| ||||| ||||||| || || |||||||| || || |||||||||||||||
Sbjct 2681 ACAGGTCGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGT 2622
Query 1628513 GGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGG 1628572
||||||| |||||||| | |||| | ||||| ||||||||||| |||||| |
Sbjct 2621 GGTTCTTGCGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAG 2562
Query 1628573 CAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600
||||||| || ||||||| ||| ||
Sbjct 2561 CAAAGGCTCCAGGGCGCTTGTTGCCACC 2534
Score = 98.7 bits (108), Expect = 1e-14
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 1627870 TCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGGCC 1627929
||||| || ||||| || || || || || || |||||||||| || || | |||
Sbjct 3201 TCGGCTAGACCCTGAACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGCC 3142
Query 1627930 TCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACCTGG 1627989
|||||||| || || | |||| |||||| | |||||| ||||||| ||| ||||||| |
Sbjct 3141 TCGGGCACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTTG 3082
Query 1627990 ACGATCTCGTGCAG 1628003
||||||||||||
Sbjct 3081 GTGATCTCGTGCAG 3068
>seq91
Length=92559
Score = 98.7 bits (108), Expect = 1e-14
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 1574065 CCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGC 1574124
|||| ||||| ||| | |||||||||||||| ||||||| | || || | |||||||
Sbjct 52436 CCGGCCGCCATAAGCTTATCATCCTCGACGAAGCCGACTCTATGACTTCTGGTGCCCAGC 52495
Query 1574125 AGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCA 1574184
| ||||| || || ||||||| || |||| || || |||||||| | || ||||
Sbjct 52496 AAGCCCTTCGTCGTACGATGGAAATATACTCCAATACTACCCGCTTTGCATTTGCCTGCA 52555
Query 1574185 ACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTTGTGC 1574244
| ||| | | |||||||| |||| ||| || ||||| || |||||| || ||
Sbjct 52556 ATCAGTCTAACAAGATCATCGAGCCCCTACAATCGCGTTGCGCTATCTTGCGCTATGCGC 52615
Query 1574245 GCCTGGGTGACG 1574256
| || |||||
Sbjct 52616 GTCTTACTGACG 52627
>seq425
Length=119061
Score = 96.9 bits (106), Expect = 4e-14
Identities = 171/247 (69%), Gaps = 2/247 (1%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || || |||||||||||||||||||||| | || || ||
Sbjct 45278 GCCTTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATG 45337
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | ||| ||| ||| || || | | |
Sbjct 45338 TTCTCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGTTGCCAAGGGCCACT 45397
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA-T 868869
| || |||||||| || ||||| || ||||| ||| ||| | ||||||||||||| |
Sbjct 45398 AAGAGACGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCCGAGT 45457
Query 868870 GAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929
| | || || || | ||| ||| ||||| ||||| || ||||||| ||| |||
Sbjct 45458 AAACCGCA-AGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGAT 45516
Query 868930 GATCTGC 868936
||| |||
Sbjct 45517 GATTTGC 45523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107064274944421
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |