Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq198 104 2e-17 seq366 98.7 8e-16 >seq198 Length=92858 Score = 104 bits (114), Expect = 2e-17 Identities = 218/323 (67%), Gaps = 4/323 (1%) Strand=Plus/Plus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 ||||| ||||||| ||||| | || | | || | ||||||||| ||||| || Sbjct 12054 GATGACGACAGTCTCGGGGTTCTTGCACTTCTTGCAGAGAACAAACTTGACAATGAAGCC 12113 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 | | | ||||| ||||| | ||| || || ||||||| ||| | || || | Sbjct 12114 GTAGACGTGATCCTGCAACTTCTTTGTGTCATGTGAACCGTTGATGATCCAGCGATCATC 12173 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 || | | || || || ||||||||| | ||||||||||| || ||| | Sbjct 12174 CGGAGGGTCAATATTGGTCTGGGCACCCAGCTCGAAACCGAAGTACTTGATCAGGTGAGC 12233 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550 | || || | |||| || ||||| | | || |||||| |||||||||||||| || Sbjct 12234 ACCAGGGCGAGCCAGCGACTGGGCGACGGCAGACAGGTTGACAATGACAGTCTTGATACC 12293 Query 34551 GTTGCCCTTTCCTTCGACCTTGG--CGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCG 34608 || || || || |||| ||| | | ||| || ||||||||||| ||||||||| | Sbjct 12294 ATTACCTTTACCCTCGATCTTAGTTTGAAGA--CGGGGCATTTTGTAACGGTAGAACTGG 12351 Query 34609 TCCGCCACATTGCGGTTAACGTT 34631 || | |||| | |||| ||||| Sbjct 12352 TCGGTAACATCGGGGTTGACGTT 12374 >seq366 Length=80546 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| ||| | || ||||||||||| ||| | || ||| || Sbjct 27550 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 27491 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | | || ||| ||||||| || || || || | || |||||| Sbjct 27490 GATACTATTGACAATGTCAAATCGAAGATTCAAGATAAGGAGGGTATCCCTCCGGATCAG 27431 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || |||| ||| || || ||||||||||||| | | || | | || |||||| Sbjct 27430 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAAC 27371 Query 110453 ATTCAAAAAGAATCTAC 110469 |||||||| || ||||| Sbjct 27370 ATTCAAAAGGAGTCTAC 27354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412837006234109