Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq142 141 1e-27 seq91 138 2e-26 seq286 116 6e-20 seq425 104 4e-16 seq315 95.1 2e-13 >seq142 Length=98154 Score = 141 bits (156), Expect = 1e-27 Identities = 296/443 (67%), Gaps = 8/443 (2%) Strand=Plus/Minus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631 ||| || || ||||||||||||||||| | || | ||||||||||||| |||||| Sbjct 2972 ACTCGATGATCTCGGTGCACAGGTTGGAG--CTGCGAATAGTGCCCAGGTTCTTCTGGTT 2915 Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691 ||| || |||| ||| ||||||| ||||||| | || || |||||| | || || Sbjct 2914 GCTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGC 2855 Query 2071692 CGTGACGATGGCCGACCAAA--TTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNN 2071749 | | |||||| |||| | || | || | |||| | ||||||||| Sbjct 2854 CTCAAGGATGGCGTACCATAGCTTCTGGGCCTTGATGGTGAGG--CGACCGCGGCCCTCG 2797 Query 2071750 NNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGC 2071809 | || || || || || | |||| ||| ||| ||| ||||| Sbjct 2796 CTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGG 2737 Query 2071810 GCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGG 2071869 |||| ||||| | ||| | ||||| | || || | || || ||| |||||| Sbjct 2736 CACTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGG 2677 Query 2071870 TCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 2071929 ||| |||||||| | || || ||||| || || |||||||||||||||||||| Sbjct 2676 TCGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTC 2617 Query 2071930 TTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 2071989 || |||||||| | |||| || ||||| ||||||||||| |||||| |||||| Sbjct 2616 TTGCGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAG 2557 Query 2071990 GCGCCCTTGCGCTTGCCGCCGCC 2072012 || || ||||||| ||| || Sbjct 2556 GCTCCAGGGCGCTTGTTGCCACC 2534 >seq91 Length=92559 Score = 138 bits (152), Expect = 2e-26 Identities = 176/240 (73%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 2019202 CCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGC 2019261 |||||||||| ||| | ||||||||||| || ||||||| | || || | ||||||| Sbjct 52436 CCGGCCGCCATAAGCTTATCATCCTCGACGAAGCCGACTCTATGACTTCTGGTGCCCAGC 52495 Query 2019262 AGGCCCTCCGATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGC 2019320 | ||||| || ||| || ||||||| ||| |||| || || || ||||| | |||||| Sbjct 52496 AAGCCCTTCG-TCGTACGATGGAAATATACTCCAATACTACCCGCTTTGCATTTGCCTGC 52554 Query 2019321 AACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCG 2019380 || ||| | | ||||||| |||| || |||||||| |||||||||| |||| Sbjct 52555 AATCAGTCTAACAAGATCATCGAGCCCCTACAATCGCGTTGCGCTATCTTGCGCTATGCG 52614 Query 2019381 CGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440 || || || |||| || ||| | |||||| | |||| ||||| |||||| | ||| Sbjct 52615 CGTCTTACTGACGAACAAGTCGTCAAGCGTCTACTACAGATCATCGATGCCGAAGATGTC 52674 >seq286 Length=39364 Score = 116 bits (128), Expect = 6e-20 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| ||||||| ||||| |||||||| | || ||| | || ||||||||||| || ||| Sbjct 1345 GCCTCCAACTATCTCGATATCAAGCCTTTGCTGGATGTTGGCTGCAAGACCGTCGCAAAC 1404 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753 | |||||||||||||| |||||||| |||||||||||||| ||||| Sbjct 1405 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGCAAGACCTTCAACAT 1451 >seq425 Length=119061 Score = 104 bits (114), Expect = 4e-16 Identities = 157/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 |||||||||||||||||||||| | || || || |||||| | ||| ||||||| Sbjct 45304 CTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTCTCCATGAAGTCGAAGGGGTTGGT 45363 Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAAT 794044 | |||| ||| ||| || || | | | | || |||||||| ||||| ||||| Sbjct 45364 AGCACGGTACACCTTGTCGTTGCCAAGGGCCACTAAGAGACGGTCGGCAACGAACTCAAT 45423 Query 794045 GTACTGGCACATGAGGGCGGCGTTCATGCCGA-TGAGCGCCACGGGCAGCGACTCGCTGA 794103 ||||| ||| ||| | ||||||||||||| | | | || || || | ||| | | Sbjct 45424 ATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTAAACCGCA-AGGAAGAGCCTCAGTCA 45482 Query 794104 CAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGC 794144 ||||| ||||| || ||||||| ||| ||||||| ||| Sbjct 45483 GGAACTCCTTCTCAATGACGACGGCGTCGGTGATGATTTGC 45523 >seq315 Length=34638 Score = 95.1 bits (104), Expect = 2e-13 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| ||||| |||||||| || ||||||||| ||||||| ||||| ||| Sbjct 16774 GTACTTGGTGACAGCCTTAGTACCCTCCGAAACGGCGTGCTTGGCCAGCTCGCCAGGCAG 16833 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTC 1485557 ||||||||| || ||||||||| || Sbjct 16834 GATCAGGCGAACACTGGTCTGGATTTC 16860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916149280025807