Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq142 141 1e-27
seq91 138 2e-26
seq286 116 6e-20
seq425 104 4e-16
seq315 95.1 2e-13
>seq142
Length=98154
Score = 141 bits (156), Expect = 1e-27
Identities = 296/443 (67%), Gaps = 8/443 (2%)
Strand=Plus/Minus
Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631
||| || || ||||||||||||||||| | || | ||||||||||||| ||||||
Sbjct 2972 ACTCGATGATCTCGGTGCACAGGTTGGAG--CTGCGAATAGTGCCCAGGTTCTTCTGGTT 2915
Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691
||| || |||| ||| ||||||| ||||||| | || || |||||| | || ||
Sbjct 2914 GCTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGC 2855
Query 2071692 CGTGACGATGGCCGACCAAA--TTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNN 2071749
| | |||||| |||| | || | || | |||| | |||||||||
Sbjct 2854 CTCAAGGATGGCGTACCATAGCTTCTGGGCCTTGATGGTGAGG--CGACCGCGGCCCTCG 2797
Query 2071750 NNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGC 2071809
| || || || || || | |||| ||| ||| ||| |||||
Sbjct 2796 CTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGG 2737
Query 2071810 GCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGG 2071869
|||| ||||| | ||| | ||||| | || || | || || ||| ||||||
Sbjct 2736 CACTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGG 2677
Query 2071870 TCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 2071929
||| |||||||| | || || ||||| || || ||||||||||||||||||||
Sbjct 2676 TCGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTC 2617
Query 2071930 TTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 2071989
|| |||||||| | |||| || ||||| ||||||||||| |||||| ||||||
Sbjct 2616 TTGCGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAG 2557
Query 2071990 GCGCCCTTGCGCTTGCCGCCGCC 2072012
|| || ||||||| ||| ||
Sbjct 2556 GCTCCAGGGCGCTTGTTGCCACC 2534
>seq91
Length=92559
Score = 138 bits (152), Expect = 2e-26
Identities = 176/240 (73%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 2019202 CCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGC 2019261
|||||||||| ||| | ||||||||||| || ||||||| | || || | |||||||
Sbjct 52436 CCGGCCGCCATAAGCTTATCATCCTCGACGAAGCCGACTCTATGACTTCTGGTGCCCAGC 52495
Query 2019262 AGGCCCTCCGATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGC 2019320
| ||||| || ||| || ||||||| ||| |||| || || || ||||| | ||||||
Sbjct 52496 AAGCCCTTCG-TCGTACGATGGAAATATACTCCAATACTACCCGCTTTGCATTTGCCTGC 52554
Query 2019321 AACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCG 2019380
|| ||| | | ||||||| |||| || |||||||| |||||||||| ||||
Sbjct 52555 AATCAGTCTAACAAGATCATCGAGCCCCTACAATCGCGTTGCGCTATCTTGCGCTATGCG 52614
Query 2019381 CGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440
|| || || |||| || ||| | |||||| | |||| ||||| |||||| | |||
Sbjct 52615 CGTCTTACTGACGAACAAGTCGTCAAGCGTCTACTACAGATCATCGATGCCGAAGATGTC 52674
>seq286
Length=39364
Score = 116 bits (128), Expect = 6e-20
Identities = 90/107 (84%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| ||||||| ||||| |||||||| | || ||| | || ||||||||||| || |||
Sbjct 1345 GCCTCCAACTATCTCGATATCAAGCCTTTGCTGGATGTTGGCTGCAAGACCGTCGCAAAC 1404
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753
| |||||||||||||| |||||||| |||||||||||||| |||||
Sbjct 1405 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGCAAGACCTTCAACAT 1451
>seq425
Length=119061
Score = 104 bits (114), Expect = 4e-16
Identities = 157/221 (71%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984
|||||||||||||||||||||| | || || || |||||| | ||| |||||||
Sbjct 45304 CTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTCTCCATGAAGTCGAAGGGGTTGGT 45363
Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAAT 794044
| |||| ||| ||| || || | | | | || |||||||| ||||| |||||
Sbjct 45364 AGCACGGTACACCTTGTCGTTGCCAAGGGCCACTAAGAGACGGTCGGCAACGAACTCAAT 45423
Query 794045 GTACTGGCACATGAGGGCGGCGTTCATGCCGA-TGAGCGCCACGGGCAGCGACTCGCTGA 794103
||||| ||| ||| | ||||||||||||| | | | || || || | ||| | |
Sbjct 45424 ATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTAAACCGCA-AGGAAGAGCCTCAGTCA 45482
Query 794104 CAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGC 794144
||||| ||||| || ||||||| ||| ||||||| |||
Sbjct 45483 GGAACTCCTTCTCAATGACGACGGCGTCGGTGATGATTTGC 45523
>seq315
Length=34638
Score = 95.1 bits (104), Expect = 2e-13
Identities = 73/87 (84%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| ||||| |||||||| || ||||||||| ||||||| ||||| |||
Sbjct 16774 GTACTTGGTGACAGCCTTAGTACCCTCCGAAACGGCGTGCTTGGCCAGCTCGCCAGGCAG 16833
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTC 1485557
||||||||| || ||||||||| ||
Sbjct 16834 GATCAGGCGAACACTGGTCTGGATTTC 16860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916149280025807
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |