Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq514 100 2e-15 seq541 86.0 5e-11 >seq514 Length=36044 Score = 100 bits (110), Expect = 2e-15 Identities = 191/280 (68%), Gaps = 1/280 (0%) Strand=Plus/Minus Query 282200 TCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCA 282259 |||||||| ||||| | ||| | || | || | | || | ||| | ||||| ||| Sbjct 17803 TCTTCACCACCCAAATGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCATCCTCA 17744 Query 282260 AGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATT 282319 | | || || | ||||| || |||||||||| ||| || || || || || Sbjct 17743 ATGGTCAGCAGCGAGACATCGAAAGTGCCACCACCCAGATCGAAGATCAGGACGTTGCGC 17684 Query 282320 TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATA 282379 || || || ||||||||||| || |||| ||||| ||||| || || ||||| Sbjct 17683 TCACCCTCGACCTTCTTATCAAGACCGTAGGCAATGGCAGCGGCAGTGGGCTCGTTAATG 17624 Query 282380 ATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAA 282439 || | || ||||| ||||| ||||| || | || || || || || | || ||| Sbjct 17623 ATACGCAGGACATTCAGACCGGCAATAAGACCGGAGTCCTTGGTAGCCTGACGCTGAGAA 17564 Query 282440 TCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA 282479 ||||| || || ||||||||||| ||||| || | ||||| Sbjct 17563 TCGTTGAAGTAGGCAGGAACAGTGATAACAGCGT-TGTTA 17525 >seq541 Length=36825 Score = 86.0 bits (94), Expect = 5e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 || || |||||||| | |||||||||||||||||| | ||| |||| ||| | || ||| Sbjct 10457 GAGTTCTTCTTCCACGCCATGGCTGGTCGTGAAGGTTTGATTGATACTGCTGTCAAGACT 10398 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTA 435244 || || ||||| || |||||| | || |||||| ||||||||| ||| Sbjct 10397 GCCGAAACTGGATACATTCAACGTCGTCTAGTCAAGGCTCTTGAAGATGTTA 10346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740585575558338