Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq366 122 8e-23 seq425 86.0 6e-12 >seq366 Length=80546 Score = 122 bits (134), Expect = 8e-23 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| |||| ||||| ||||| | | ||||| |||||||||||||||||| | ||| Sbjct 27329 ACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGT 27388 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| ||| || ||||| || |||| | | || |||||||| ||||| ||||| || || Sbjct 27389 ACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGGATACC 27448 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || ||||| ||| || ||| | | || | |||||| | | ||| || || | Sbjct 27449 CTCCTTATCTTGAATCTTCGATTTGACATTGTCAATAGTATCAGAAGACTCAACCTCAAG 27508 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||| ||||| ||||| || | ||| || ||||| Sbjct 27509 GGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 27550 >seq425 Length=119061 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 47057 CATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACA 47116 ||| || |||||||| | |||| ||| || || || || || ||||||||||| | Sbjct 45499 CATTGAGAAGGAGTTCCTGACTGAGGCTCTTCCTTGCGGTTTACTCGGCATGAACGCTGA 45440 Query 47117 GTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACC 47176 ||| | ||||||||||| || || || ||||| || ||| || || |||| Sbjct 45439 CCTGATGAAGCAGTATATTGAGTTCGTTGCCGACCGTCTCTTAGTGGCCCTTGG-CAAC- 45382 Query 47177 GAAATATTTTAA--TGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGC 47234 || | | || |||| || || || || || ||| | |||||||| || | |||| Sbjct 45381 GACAAGGTGTACCGTGCTACCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGGGGGC 45322 Query 47235 AAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 || ||||| |||||||||||||| || || || || Sbjct 45321 AAGACCAACTTTTTCGAGAAACGTGTTGGTGACTA 45287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476605760674680