Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq366 122 8e-23
seq425 86.0 6e-12
>seq366
Length=80546
Score = 122 bits (134), Expect = 8e-23
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| |||| ||||| ||||| | | ||||| |||||||||||||||||| | |||
Sbjct 27329 ACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGT 27388
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
||| ||| || ||||| || |||| | | || |||||||| ||||| ||||| || ||
Sbjct 27389 ACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGGATACC 27448
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| ||||| ||| || ||| | | || | |||||| | | ||| || || |
Sbjct 27449 CTCCTTATCTTGAATCTTCGATTTGACATTGTCAATAGTATCAGAAGACTCAACCTCAAG 27508
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||||| ||||| ||||| || | ||| || |||||
Sbjct 27509 GGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 27550
>seq425
Length=119061
Score = 86.0 bits (94), Expect = 6e-12
Identities = 150/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 47057 CATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACA 47116
||| || |||||||| | |||| ||| || || || || || ||||||||||| |
Sbjct 45499 CATTGAGAAGGAGTTCCTGACTGAGGCTCTTCCTTGCGGTTTACTCGGCATGAACGCTGA 45440
Query 47117 GTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACC 47176
||| | ||||||||||| || || || ||||| || ||| || || ||||
Sbjct 45439 CCTGATGAAGCAGTATATTGAGTTCGTTGCCGACCGTCTCTTAGTGGCCCTTGG-CAAC- 45382
Query 47177 GAAATATTTTAA--TGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGC 47234
|| | | || |||| || || || || || ||| | |||||||| || | ||||
Sbjct 45381 GACAAGGTGTACCGTGCTACCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGGGGGC 45322
Query 47235 AAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269
|| ||||| |||||||||||||| || || || ||
Sbjct 45321 AAGACCAACTTTTTCGAGAAACGTGTTGGTGACTA 45287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476605760674680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |