Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq425 132 7e-25 seq91 104 3e-16 seq142 102 1e-15 >seq425 Length=119061 Score = 132 bits (146), Expect = 7e-25 Identities = 346/512 (68%), Gaps = 22/512 (4%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | ||||| || ||||| |||||||| || ||||| || |||||| | || | Sbjct 46129 GATCTGGCAGATGTAT-AAGAAGGCTGAGGCCTCGTTCTGGACTGCTGAGGAGATTGATC 46071 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTC 1455887 | | || |||| ||||| ||| | | | ||||||| | ||| Sbjct 46070 TATCCAAAGATCTCCACG----ACTGGAACAACCGGCTTACCAAGGACGAGCAGTACTTC 46015 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| ||| | || ||||| ||| || ||| |||||||| || ||||||||||| Sbjct 46014 ATCTCTCACATTCTGGCCTTCTTT-GCTGCCTCTGATGGCATTGTCAACGAGAACCTGGT 45956 Query 1455948 CGGCCGCTT-TATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006 | || || | || |||||||| | || ||||| |||| || || || ||||||| Sbjct 45955 TGAGCGTTTCTCTGGC-GAGGTCCAGATCCCTGAGGCTCGTTGCTTCTATGGTTTCCAGA 45897 Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066 || || || ||||||||||| || |||||||| | ||||||| || || |||||| Sbjct 45896 TCATGATGGAGAACATCCACTCCGAGACCTACTCTTTGTTGATCGATACTTATATCAAGG 45837 Query 1456067 ACCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 | || | | || | || |||| || ||| || ||||| | || | | | Sbjct 45836 AGCCTGCCCAG-CGCACGTACCTGTTCAACGCTATTGACACCATTCCCTGCATACGCCGC 45778 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGC 1456185 || ||||||||||| | || |||||| | | || | || || ||||| |||| | Sbjct 45777 AAAGCCGACTGGGCTCTCAAATGGATCTGCGA-CAGAGAATCAAC-TTTTGCTCAGCGCC 45720 Query 1456186 TCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTG-CGCCATCTTT 1456243 | ||| ||||| | ||||||||||||||| || || || || | || | | |||||| Sbjct 45719 TAATCGCTTTTGCTGCCGTCGAGGGCATCTTCTTTTCTGG-AGCCTTTGCCTCTATCTTT 45661 Query 1456244 TGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||| ||||| || || |||||||| || Sbjct 45660 TGGCTGCGCAAGCGTGGTCTGATGCCCGGCCT 45629 Score = 91.5 bits (100), Expect = 2e-12 Identities = 179/257 (70%), Gaps = 6/257 (2%) Strand=Plus/Minus Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577 |||| |||||| ||| ||||||| || ||||| ||||| | | ||| | || || Sbjct 45524 AGCAAATCATCACCGACGCCGTCGTCATTGAGAAGGAGTTCCTGACTGAGGCTCTTCCT- 45466 Query 1456578 TGGCGCTCA-TCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCG 1456636 || | | | ||||||||||||| | || ||| ||||| ||||| || || |||| Sbjct 45465 TGCGGTTTACTCGGCATGAACGCTGAC-CTGATGAAGCAGTATATTGAGTTC-GTTGCCG 45408 Query 1456637 ACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCA 1456696 |||| || | | ||| || ||| || | ||| ||||| | ||||||| ||| Sbjct 45407 ACCGTCTCTTAGTGGCCCTTGGCAACG-ACAAGGTGTACCGTGCTACCAACCCCTTCGAC 45349 Query 1456697 TGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAG 1456755 | |||||| || || || | |||||||||||||||||||||| || | ||| || Sbjct 45348 TTCATGGAGAACATTTCTCTGGGGGGCAAGACCAACTTTTTCGAGAAACGTGTTGGTGAC 45289 Query 1456756 TACGCCAAGGCCGGCGT 1456772 ||| |||||||| || Sbjct 45288 TACCAGAAGGCCGGTGT 45272 >seq91 Length=92559 Score = 104 bits (114), Expect = 3e-16 Identities = 149/206 (72%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906 ||| ||| ||||||| || ||| || |||||| ||| || ||||| || |||| || Sbjct 52636 CGACTTGTTCGTCAGTAAGACGCGCATAGCGCAAGATAGCGCAACGCGATTGTAGGGGCT 52577 Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966 |||||| | | ||| |||||||| | ||||| || || ||||||| | ||| Sbjct 52576 CGATGATCTTGTTAGACTGATTGCAGGCAAATGCAAAGCGGGTAGTATTGGAGTATATTT 52517 Query 332967 CCATGGT-CGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGG 333025 |||| || |||| | ||||| || ||||| | | || | ||||||| ||||||||| Sbjct 52516 CCATCGTACGAC-GAAGGGCTTGCTGGGCACCAGAAGTCATAGAGTCGGCTTCGTCGAGG 52458 Query 333026 ATGATGATCTTGTGGCGCCCGTGCGG 333051 ||||| | ||| ||||| ||| |||| Sbjct 52457 ATGATAAGCTTATGGCGGCCG-GCGG 52433 >seq142 Length=98154 Score = 102 bits (112), Expect = 1e-15 Identities = 341/523 (65%), Gaps = 38/523 (7%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 || ||| ||||||| || |||||||| |||||| || |||||||| ||||| || Sbjct 2534 GGTGGCAACAAGCGCCCTGGAGCCTTTGCTATCTACCTAGAGCCGTGGCATGCCGATGTC 2593 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | | || ||||| |||||||||||||||| ||||| || || |||| Sbjct 2594 TTCGAGTTCCTCGACCTACGCAAGAACCACGGCAAGGA----GGAGATTCGTGCCCGCG- 2648 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 | || || | |||||||| ||||||||| ||| || | | || | | Sbjct 2649 -ACCTGTTCCTAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAAGAACGCC 2707 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 ||||| | ||| | ||||| |||| ||||| ||| ||| ||||| || | | Sbjct 2708 AACTGGACACTCATGTGCCCCAACGAGTGCCCCGGTCTGGCCGACTGCTACGGTGACGAG 2767 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGG-------ACCGTCGT 262080 || || || || || || ||||| ||| || Sbjct 2768 TTCGAGGCTCTGTACGA----AAAGTACGAGAGCGAGGGCCGCGGTCGCCTCACCATCAA 2823 Query 262081 GCCCGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTA 262140 | || || || || | |||| ||||| | | |||||| | ||||||||| | || | Sbjct 2824 GGCC-CA-GA-AGCTATGGTACGCCATCCTTGAGGCCCAAACCGAGACCGGAAACCCGTT 2880 Query 262141 CATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CG 262198 |||| | |||||||| ||| |||| || ||||||||| ||||||||||||| | || Sbjct 2881 CATGCTGTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACCTGGGCACTATTCG 2940 Query 262199 ACAGAGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAG---- 262254 ||| |||||||||||||||||||| || || | | ||||| | || | ||| Sbjct 2941 -CAG-CTCCAACCTGTGCACCGAGATCATCGAG--TACTGCGCCC-CTGATG-AAGTTGC 2994 Query 262255 TGTGTGCAACCT---CTCGAGCGTGGCCCTGCCCAAGTTTGTC 262294 |||||||||||| |||| ||||||| || ||||||| Sbjct 2995 TGTGTGCAACCTGGCCTCG---CTGGCCCTACCGTCGTTTGTC 3034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177723139471906