Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq425 158 2e-33 seq142 114 2e-20 >seq425 Length=119061 Score = 158 bits (174), Expect = 2e-33 Identities = 551/855 (64%), Gaps = 20/855 (2%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || ||||| |||||||| |||||||||||||| || || ||||| ||| || || || Sbjct 45281 TTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTC 45340 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| || || || || || ||| || || | || | | | Sbjct 45341 TCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGTTGCCAAGGGCCACTAAG 45400 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | | || ||||| || || || || ||||||| ||| ||||| || |||| Sbjct 45401 AGACGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCC---GAGT 45457 Query 39506 TTAACT---GGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562 | | || |||||||| || || ||||| || || ||| | ||||| || || || Sbjct 45458 AAACCGCAAGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGATG 45517 Query 39563 ATCGATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGG 39620 || || | || | || | | || | | | || |||| || ||||| Sbjct 45518 ATT--TGCTCAACAAGTTCCTTGCCAGGGCGGTTGTTCAGGTGGGAGAACAATAGGCAGG 45575 Query 39621 CGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAG 39680 | |||||| || || |||||||| | ||| | ||||||||||| || || || | Sbjct 45576 CAAAGTCAGTGTGCAGACCCTCATCACGGGAAATCAGCTCGTTAGAAAAGGTCAGGCCGG 45635 Query 39681 GCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGC 39740 |||| ||||||||||| |||||||| || | ||||| | ||||||||||||||||| Sbjct 45636 GCATCAGACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCTCCAGAAAAGAAGATGC 45695 Query 39741 CTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT-----AT 39795 | || || || ||||| || | || | || | || ||| || | ||| || Sbjct 45696 CCTCGACGGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTC--TCTGTCGCAGAT 45753 Query 39796 CCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 39855 ||| || | ||||| || ||||| || || || || || || ||||| || || Sbjct 45754 CCATTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAA 45813 Query 39856 GAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTC 39915 || || | || || || | ||| ||||| || |||| | || | || Sbjct 45814 CAGGTACGTGCGCTGGGCAGGCTCCTTGATATAAGTATCGATCAACAAAGAGTAGGTCTC 45873 Query 39916 TGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTG 39975 || |||||||| || ||| ||||| || || || || || | || |||| || || Sbjct 45874 GGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTG 45933 Query 39976 TACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAA 40035 ||||| | | || | || ||| || || || || || |||||| || ||||| Sbjct 45934 GACCTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCATCAGAGGCAGCAAA 45993 Query 40036 AAATGCCAATACATGTTTAATAAAATATTTTTCATC---GGGTGTCAATTTATTCCAGTC 40092 || |||| | || || || || | || || || | || |||||||| Sbjct 45994 GAAGGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCCAGTC 46053 Query 40093 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTT 40152 | || |||||| |||| ||| | || ||||| ||||| ||||| ||||| ||||| || Sbjct 46054 GTGGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTT 46113 Query 40153 GTACATGTTCCATAT 40167 ||||| | ||| || Sbjct 46114 ATACATCTGCCAGAT 46128 >seq142 Length=98154 Score = 114 bits (126), Expect = 2e-20 Identities = 242/361 (67%), Gaps = 0/361 (0%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 || || ||||| || || ||||||||||| || |||| || || || | || | | | Sbjct 2694 ACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATC 2635 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 || || || || || || || ||||| ||||| | | ||| | |||||| || Sbjct 2634 TCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGC 2575 Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774 ||||| || || || | | |||| || || || || || ||||| || | || | ||| Sbjct 2574 TCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCG 2515 Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834 ||||| || |||| | |||||| || | || || || || | || || || |||| | Sbjct 2514 GTGTTGTTGAAGACGCGCAGCATAGGCACGATGCCGTTTGACGTGCCGTTAGTGCCAGCA 2455 Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894 || || || | ||||| ||| | || || || || || ||||| || Sbjct 2454 ATGTACGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCCAATACCACCGGCCATCTTG 2395 Query 69895 GAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATG 69954 ||||| | ||||||| |||| || || || |||||||| ||||| ||||| ||||| Sbjct 2394 GAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCAATGCTGTCATCCTTCATG 2335 Query 69955 T 69955 | Sbjct 2334 T 2334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686900960653320