Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq142 239 6e-58 seq328 95.1 2e-14 >seq142 Length=98154 Score = 239 bits (264), Expect = 6e-58 Identities = 904/1401 (65%), Gaps = 43/1401 (3%) Strand=Plus/Minus Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765 |||||||||| | ||||| || || ||||| || || || |||| |||||| | ||| | Sbjct 3548 GGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGGATTTGAGAGGTCG 3489 Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825 | || || ||||| || || | | || ||| || | ||| | || |||||| ||| Sbjct 3488 AAGCAGTCGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTT 3429 Query 110826 CCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884 | ||||| ||||||| | | ||| || | || |||| ||||||| ||||| Sbjct 3428 CTTTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTGACATTCC-ACATGTCGAACTGC 3370 Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944 || | ||||| || | ||||| |||||| |||| |||| |||| || | ||| Sbjct 3369 AGAATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCA 3310 Query 110945 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 111004 | || || || |||| ||||| || ||||| || || || | ||||| | Sbjct 3309 ATCTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGC 3250 Query 111005 TCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGA 111059 ||| || | || ||||| ||||||| | | || |||| || | Sbjct 3249 GTGCGGGCCTCGGCAGACTCAAAGGGCATGCGTAGAGCTAGGAAGG-----CATCGGCTA 3195 Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 111118 |||| |||||||| | |||||||| | ||| |||||||| || | || ||| Sbjct 3194 GACCCTGAACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGC---CTCGG 3138 Query 111119 --ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 ||||||||| |||| ||| |||| ||||| || || || | ||| |||| Sbjct 3137 GCACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGA 3078 Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236 | || || || || | | ||| | || | | | || |||| || || |||| Sbjct 3077 TCTCGTGCAGCTTCTGGAAGTCATACTCGCCCTTGTTGTAATCGACAAACGACGGTAGGG 3018 Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296 | | || |||| ||||| ||||| ||||| | |||||| | || || | Sbjct 3017 CCAGCGAGGCCAGGTTGCACACAGCAACTTCATCAGGGGCGCAGTACTCGATGATCTCGG 2958 Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356 | || | |||||| || ||| || |||| ||||| ||||| |||||| ||||||| | Sbjct 2957 TGCACAGGTTGGAGCTGCGAATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGG 2898 Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416 |||||||||| |||||| | || | || ||||| || || | | || || || | || Sbjct 2897 CATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCAAGGATGGCGTACC 2838 Query 111417 A-AACATCGGCGGCTGGTACAATGGCGTTG---GCCCGTCCCTCCGCCTCGTACTTTGTG 111472 | | | || | | || | |||| | | | || ||||| |||||||||| | Sbjct 2837 ATAGCTTCTGGGCCTTG----ATGGTGAGGCGACCGCGGCCCTCGCTCTCGTACTTTTCG 2782 Query 111473 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 111532 || || || || ||||| ||||| ||||| ||||| || || || || || Sbjct 2781 TACAGAGCCTCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCAC 2722 Query 111533 AAAAGAGACCA-TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591 | || | ||| ||| | ||| ||| || ||||||||||| ||||| ||||||||||| Sbjct 2721 ATGAGTGTCCAGTTGGCGTTCTT-CTCGACACGCTTCATGAACAGGTCGGGAATCCACAG 2663 Query 111592 GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 111651 || | || || || | ||| ||| || | || ||||| |||| || || Sbjct 2662 GGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAG 2603 Query 111652 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTC 111707 |||||| | || ||| || ||||| ||||| || |||| || | | ||| | | Sbjct 2602 GAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTT 2543 Query 111708 GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 111767 | | ||| | || | |||||||| || ||| ||| || ||||| ||||| || | | Sbjct 2542 GTTG-CCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATAGGCACGA 2484 Query 111768 TACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATCATG 111825 | || | ||| || || || || || |||||| |||| | | | || Sbjct 2483 TGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAG--CCGGTGGCGCGGATACGGTG 2426 Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885 || || || |||||||| || ||| ||| ||||| ||||| | | || || | Sbjct 2425 GACGTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATC 2366 Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945 |||||||| | || ||| ||||| || ||| | |||||| || | ||| || Sbjct 2365 GTAGATACCCTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTG-GG 2307 Query 111946 TCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT--GGGA 112002 || || || ||||| ||||| || || |||| ||||| ||| | | ||| ||| Sbjct 2306 CCTGCGGCGTGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGA--AAAGCTTACTGGA 2249 Query 112003 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGAC 112062 ||| | || ||| ||||| | ||| || | || || ||| |||| || || Sbjct 2248 CATGTAGTTGTACGTCTCGAGCACACGGTCGACACGGTCGCCCCAGATACCGACGGCAAC 2189 Query 112063 CCGCATGAACATGTACTGTGG 112083 ||||||| ||||| ||| || Sbjct 2188 ACGCATGATCATGTGCTGCGG 2168 >seq328 Length=24156 Score = 95.1 bits (104), Expect = 2e-14 Identities = 209/310 (67%), Gaps = 4/310 (1%) Strand=Plus/Plus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 || || || || || ||||| |||||||| ||| || | |||||| | |||| ||| Sbjct 4326 GCGTCGATTTCGTCGATGAAAACAATACACGGTGAGTTCTTGCGGGCTGTCGCAAACAGA 4385 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCG--GCAGAGC 11747 ||||| || | || || ||||| |||||||| |||||||| | | | || || | Sbjct 4386 TCGCGTACACGCGAGGGGCCGACACCGACAAACATTTCCACAAACTCGGAGCCGCTGA-C 4444 Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807 |||| | ||| || || || || || || | || || || || ||||| || | Sbjct 4445 ACTGAA-GAAAGGTACGCCGGACTCGCCGGCAGTCGCCTTAGCCAGAAGTGTCTTACCGG 4503 Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTTCCAAAATATC 11867 | || || ||| | || | ||| || ||||| |||||||||||| | ||| | Sbjct 4504 TGCCGGGAGGACCGGACAGGATGGCACCGCGGGGAATCTTGGCACCAAGACGCAAAAACT 4563 Query 11868 TCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAATCC 11927 |||| || | ||||||||| | ||||| ||| | || | || ||| |||| || | Sbjct 4564 TCTCAGGCTTCTTGAGAAACTGCACAAACTCCATGATCTCCACCTTAGCCTCGTCCATAC 4623 Query 11928 CCTCAACATC 11937 | ||||||| Sbjct 4624 CAGCAACATC 4633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628024832584800