Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq142 214 2e-50 >seq142 Length=98154 Score = 214 bits (236), Expect = 2e-50 Identities = 853/1329 (64%), Gaps = 29/1329 (2%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| |||| ||||| ||||| |||||||| ||||| |||| |||||| | || || Sbjct 3546 TAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGGATTTGAGAGGTCGAA 3487 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || |||||||| || | ||| || ||| || | ||| | | | | || |||| Sbjct 3486 GCAGTCGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTTCT 3427 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGA-GCTTTGTCTCCCCCTGCCACATATCAAACTGGAG 118360 ||||| | | ||||||| | | ||| | | | | |||||| || ||||| || Sbjct 3426 TTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTGACATT-CCACATGTCGAACTGCAG 3368 Query 118361 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 118420 || ||||| || | || || |||||| | ||| || | ||| || || || | Sbjct 3367 AATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAAT 3308 Query 118421 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGC 118480 ||| | || ||||| ||||| || || || || ||||| | ||||| | Sbjct 3307 CTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGT 3248 Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540 ||||||| | || ||||| | | || | || |||| || ||||| || Sbjct 3247 GCGGGCCTCGGCAGACTCAAAGGGCATGCGTAGAGCTAGGAAGGCATCGGCTAGACCCTG 3188 Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGG 118597 ||||| | ||||| ||||| || | |||||| || |||| ||| |||||| Sbjct 3187 AACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGC---CTCGGGCACGGG 3131 Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657 |||| |||| ||||| | | || || || ||| ||||| ||||| || || Sbjct 3130 ATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTG 3071 Query 118658 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 118717 ||||| | | | ||| | || | | | || |||| || || ||||| | || Sbjct 3070 CAGCTTCTGGAAGTCATACTCGCCCTTGTTGTAATCGACAAACGACGGTAGGGCCAGCGA 3011 Query 118718 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAA 118777 ||||| || ||||||| ||||| | |||||| || || || ||||||| Sbjct 3010 GGCCAGGTTGCACACAGCAACTTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAG 2951 Query 118778 GTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 118837 ||| || || ||| ||||||| |||||| || || ||| |||| || |||||||| Sbjct 2950 GTTGGAGCTGCGAATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTT 2891 Query 118838 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CAT 118896 ||| |||||| | || | || ||||| ||||||| || || || || | ||| | | | Sbjct 2890 GTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCAAGGATGGCGTACCATAGCTT 2831 Query 118897 CGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTT 118956 | | || | | ||| | | || ||||| |||||||||| ||| || || | Sbjct 2830 CTGGGCCTTG-ATGGTGAGGCGACCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCCT 2772 Query 118957 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 119016 | ||||| ||||| | || | || || || || | ||||| | ||| | || Sbjct 2771 CGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCC 2712 Query 119017 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 119076 | | | || ||| || ||||||||||| ||||| || ||||| || || ||| | Sbjct 2711 AGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACA 2652 Query 119077 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 119136 | || || ||| || || | || || || || | || | || || | || Sbjct 2651 GGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGA 2592 Query 119137 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAG 119190 ||| || |||||||| || ||||| | || | | || | | || ||| Sbjct 2591 CATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCC---AGGGCGCTTGTTGCCAC 2535 Query 119191 CCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGG 119250 |||||| ||||| | || ||| ||| || || || ||||| || | ||| || | | Sbjct 2534 CCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATAGGCACGATGCCGTTTG 2475 Query 119251 ATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCAT 119308 | ||| || || || || |||||| | |||| | || | ||||| || || Sbjct 2474 ACGTGCCGTTAGTGCCAGCAATGTACGAGCC--GGTGGCGCGGATACGGTGGACGTTCAG 2417 Query 119309 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 119368 |||||||| || ||| ||| ||||| || || | | || | ||||||| || Sbjct 2416 GCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACC 2357 Query 119369 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTG 119427 || || |||| |||| | ||| | |||||| ||| | || |||||| || | Sbjct 2356 CTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTG-GGCCTGCGGCG 2298 Query 119428 TACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT--GGGACATCTTGTC 119485 | ||||||||||| || || |||| ||||| ||| | | ||| |||||| | || Sbjct 2297 TGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGA--AAAGCTTACTGGACATGTAGTT 2240 Query 119486 GTAGGTCTC 119494 ||| ||||| Sbjct 2239 GTACGTCTC 2231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618428142108280