Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq367 168 2e-36 seq366 131 5e-25 seq514 125 2e-23 seq541 116 1e-20 seq355 107 6e-18 >seq367 Length=120337 Score = 168 bits (186), Expect = 2e-36 Identities = 413/616 (67%), Gaps = 9/616 (1%) Strand=Plus/Plus Query 349282 AGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGA 349341 ||||||| | | || || || || || || || || || |||||| | ||||||| Sbjct 105145 AGGTAACCGTATCACTCCTTCGTATGTCGCCTTCACTGAGGAGGAGCGTCTCGTTGGTGA 105204 Query 349342 TTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACT 349401 | || || || || || | || || || | || ||||| || |||| ||||| || Sbjct 105205 CGCCGCCAAGAACCAGGCCCCCGCCAACCCTATCAACACGGTCTTCGATGTCAAGCGTCT 105264 Query 349402 TATTGGTAG-AAGTTTTTCTGACAAATCTACACAATCTGATCTAAAACATTTTCCTTTTA 349460 |||||| | ||||| | || || | || ||||| | || || || || | | Sbjct 105265 CATTGGTCGCAAGTTCAAC-GAGAAGGAGATTCAGGCTGATATCAAGCACTTCCCGTACA 105323 Query 349461 CTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGA-ACAA 349519 ||| | ||| | | | || || || | || ||||||| | || ||||| || | Sbjct 105324 AGGTTAT--CAACA-AGGATGGCAAGCCTTTCATCAAGGTTGACTTCAAGGGTGACACCA 105380 Query 349520 AAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCT 349579 | || | | | ||||| || || || | ||| || ||| || |||||||| ||||| Sbjct 105381 AGACCTTCTCT-CCCGAGGAGATCTCTGCCATGATTCTAGGCAAGATGAAGGAGGTTGCT 105439 Query 349580 GAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAAT 349639 || | || ||||| | || || || | ||||| ||||||| || ||||| || || Sbjct 105440 GAGTCTTACCTAGGTAAGACTGTCACCCACGCTGTCGTTACTGTTCCCGCCTACTTCAAC 105499 Query 349640 GATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGA 349699 |||||||||||| || || || |||||||||| |||||| || | || |||| | Sbjct 105500 GATGCCCAGCGTCAAGCTACCAAGGATGCTGGCATCATTGCTGGTCTGAACATTCTCCGT 105559 Query 349700 ATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAA 349759 || | || || ||||||||||| || || || || || || ||||| | ||| Sbjct 105560 ATTGTCAACGAGCCCACTGCTGCCGCCATCGCCTACGGTCTCGATAAGACCGGTGCTGGT 105619 Query 349760 GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACA 349819 || | || | | | ||| ||||||||||||| |||||||| || | || | Sbjct 105620 GAGCGCCAAATCATCGTCTACGATCTAGGTGGTGGTACCTTTGATGTTTCTTTGCTGTCC 105679 Query 349820 CTTGAAGAG-GGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGA 349878 ||| |||| || | ||||| ||| || ||||||||||| || || |||||||| || Sbjct 105680 ATTG-AGAGTGGCGTCTTTGAGGTTCTGGCTACTGCTGGTGACACTCACCTTGGTGGTGA 105738 Query 349879 AGATTTTGATAATCGT 349894 ||||| ||| | ||| Sbjct 105739 GGATTTCGATCAGCGT 105754 >seq366 Length=80546 Score = 131 bits (144), Expect = 5e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || ||||||||||| || || ||||| || || Sbjct 27917 CATACCACCACGCAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGGATATTGTAGTC 27976 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || |||||||| ||||| || || |||||||| ||||| || || Sbjct 27977 GGACAGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGG 28036 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || ||||||||||| || | || ||||| || || | || || | || Sbjct 28037 GGGAATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTC 28096 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTG 140718 || || || || | ||||| ||||||| || Sbjct 28097 GACCTCGAGAGTGATGGTCTTGCCGGTTACTG 28128 >seq514 Length=36044 Score = 125 bits (138), Expect = 2e-23 Identities = 261/389 (67%), Gaps = 0/389 (0%) Strand=Plus/Plus Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 ||||||||||| | || || || || || ||| ||||| || || || || ||| Sbjct 17415 ATTGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTTACCCCCGAGGAGATCTCCTCTATG 17474 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 ||| | | || ||| || | ||||| | || | ||| || || | | ||| Sbjct 17475 GTTCTGATCAAGATGCGTGAGACCGCTGAGTCGTACCTTGGTACCACCGTTAACAACGCT 17534 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 ||||| ||||| || ||||| || || ||| | |||||| || || || || | || Sbjct 17535 GTTATCACTGTTCCTGCCTACTTCAACGATTCTCAGCGTCAGGCTACCAAGGACTCCGGT 17594 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 ||||| || | ||||| || | || ||||| || |||||||| || || ||||| Sbjct 17595 CTTATTGCCGGTCTGAATGTCCTGCGTATCATTAACGAGCCCACTGCCGCTGCCATTGCC 17654 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || |||||||| | | || || || | || || || ||| | |||||| Sbjct 17655 TACGGTCTTGATAAGAAGGTCGAGGGTGAGCGCAACGTCCTGATCTTCGATCTGGGTGGT 17714 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 || ||||| ||||| || || || || |||| || || || || || || || | ||| Sbjct 17715 GGCACTTTCGATGTCTCGCTGCTGACCATTGAGGATGGTATCTTCGAGGTCAAGTCCACT 17774 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGA 349881 || ||||| || ||| | ||||| ||||| Sbjct 17775 GCCGGTGACACTCATTTGGGTGGTGAAGA 17803 >seq541 Length=36825 Score = 116 bits (128), Expect = 1e-20 Identities = 224/328 (68%), Gaps = 2/328 (1%) Strand=Plus/Plus Query 378120 ATCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGT 378179 ||||| ||||| || || || ||||||||| || | || | ||| | ||||| Sbjct 10269 ATCAAGACCATCCTCACCGTACAGGAATTGAACGATATCTCCTAGAGAGTTACGAACAGT 10328 Query 378180 CATATCATATCTAACCATTAA-ATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAAC 378238 |||||| || | || ||| |||||| | || || | || || || ||| || | Sbjct 10329 TCCATCATA-CTTAGCACTAACATCTTCAAGAGCCTTGACTAGACGACGTTGAATGTATC 10387 Query 378239 CAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGA 378298 |||||| ||| || || ||||||||||| ||||| |||||||| |||| || |||| Sbjct 10388 CAGTTTCGGCAGTCTTGACAGCAGTATCAATCAAACCTTCACGACCAGCCATGGCGTGGA 10447 Query 378299 AGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGC 378358 |||| || || | || ||||| |||| || | || | || | || || | || Sbjct 10448 AGAAGAACTCGCTTGGCGTAAGACCACGAAGGTAAGAGTTTTCGACGAAGCCACGTGACT 10507 Query 378359 CTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAA 378418 | || |||| ||||| ||| || | ||||| | ||||| | || || ||| | |||| Sbjct 10508 CGGGAGAATAATCATCTTTGGTGAAGTGAGGAAGCGTACGGTACTTGAATCCAAAGGGAA 10567 Query 378419 TTCGTTTTCCATCAACATTCTGTTGACC 378446 | || ||||| || || | |||||||| Sbjct 10568 TACGCTTTCCTTCGACGATTTGTTGACC 10595 Score = 96.9 bits (106), Expect = 1e-14 Identities = 118/158 (75%), Gaps = 5/158 (3%) Strand=Plus/Plus Query 377439 TGATAATATTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACC 377498 ||| ||| || |||||| || || |||||| | ||||| ||| ||||| | ||||| Sbjct 9566 TGAGAAT-TTCCTTCAAA-CGGGGGACACCAAGAGTAACGTTC---TTAGAAGACACACC 9620 Query 377499 AGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGC 377558 |||||| |||||||| || || || | || |||| ||||| ||||| ||||| || || Sbjct 9621 AGCAAAATGGAAAGTGTTGAGCGTCATCTGCGTAGCAGGCTCTCCAATGGACTGAGCAGC 9680 Query 377559 AATAACGCCAACCATTTCTCCAGGATTGACAATAGCCT 377596 | ||||||||||| || || || ||| || ||||| Sbjct 9681 CAGCACGCCAACCATCTCACCGGGGCTGATAAAAGCCT 9718 >seq355 Length=31638 Score = 107 bits (118), Expect = 6e-18 Identities = 153/213 (72%), Gaps = 7/213 (3%) Strand=Plus/Plus Query 140528 AACAAGATGAAGAGTA-GACT--CTTTTTGAATATTATAATCAGATAATGTTCGCCCATC 140584 |||||||||| || |||| | || || || || || || || | || || ||||| Sbjct 6258 AACAAGATGA----TATGACTGACCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 6313 Query 140585 TTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATC 140644 || || || || ||||| ||||| || || || ||||| || ||||| || || ||||| Sbjct 6314 CTCTAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATC 6373 Query 140645 CTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGT 140704 ||| || |||| || ||||| || || | || || | ||||| ||||| || | || Sbjct 6374 CTGGATCTTAGACTTGACATTGTCGATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGT 6433 Query 140705 CTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || || || || ||||||||||| Sbjct 6434 CTTACCCGTAAGGGTCTTGACGAAAATCTGCAT 6466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515236674838139