Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq367 168 2e-36
seq366 131 5e-25
seq514 125 2e-23
seq541 116 1e-20
seq355 107 6e-18
>seq367
Length=120337
Score = 168 bits (186), Expect = 2e-36
Identities = 413/616 (67%), Gaps = 9/616 (1%)
Strand=Plus/Plus
Query 349282 AGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGA 349341
||||||| | | || || || || || || || || || |||||| | |||||||
Sbjct 105145 AGGTAACCGTATCACTCCTTCGTATGTCGCCTTCACTGAGGAGGAGCGTCTCGTTGGTGA 105204
Query 349342 TTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACT 349401
| || || || || || | || || || | || ||||| || |||| ||||| ||
Sbjct 105205 CGCCGCCAAGAACCAGGCCCCCGCCAACCCTATCAACACGGTCTTCGATGTCAAGCGTCT 105264
Query 349402 TATTGGTAG-AAGTTTTTCTGACAAATCTACACAATCTGATCTAAAACATTTTCCTTTTA 349460
|||||| | ||||| | || || | || ||||| | || || || || | |
Sbjct 105265 CATTGGTCGCAAGTTCAAC-GAGAAGGAGATTCAGGCTGATATCAAGCACTTCCCGTACA 105323
Query 349461 CTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGA-ACAA 349519
||| | ||| | | | || || || | || ||||||| | || ||||| || |
Sbjct 105324 AGGTTAT--CAACA-AGGATGGCAAGCCTTTCATCAAGGTTGACTTCAAGGGTGACACCA 105380
Query 349520 AAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCT 349579
| || | | | ||||| || || || | ||| || ||| || |||||||| |||||
Sbjct 105381 AGACCTTCTCT-CCCGAGGAGATCTCTGCCATGATTCTAGGCAAGATGAAGGAGGTTGCT 105439
Query 349580 GAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAAT 349639
|| | || ||||| | || || || | ||||| ||||||| || ||||| || ||
Sbjct 105440 GAGTCTTACCTAGGTAAGACTGTCACCCACGCTGTCGTTACTGTTCCCGCCTACTTCAAC 105499
Query 349640 GATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGA 349699
|||||||||||| || || || |||||||||| |||||| || | || |||| |
Sbjct 105500 GATGCCCAGCGTCAAGCTACCAAGGATGCTGGCATCATTGCTGGTCTGAACATTCTCCGT 105559
Query 349700 ATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAA 349759
|| | || || ||||||||||| || || || || || || ||||| | |||
Sbjct 105560 ATTGTCAACGAGCCCACTGCTGCCGCCATCGCCTACGGTCTCGATAAGACCGGTGCTGGT 105619
Query 349760 GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACA 349819
|| | || | | | ||| ||||||||||||| |||||||| || | || |
Sbjct 105620 GAGCGCCAAATCATCGTCTACGATCTAGGTGGTGGTACCTTTGATGTTTCTTTGCTGTCC 105679
Query 349820 CTTGAAGAG-GGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGA 349878
||| |||| || | ||||| ||| || ||||||||||| || || |||||||| ||
Sbjct 105680 ATTG-AGAGTGGCGTCTTTGAGGTTCTGGCTACTGCTGGTGACACTCACCTTGGTGGTGA 105738
Query 349879 AGATTTTGATAATCGT 349894
||||| ||| | |||
Sbjct 105739 GGATTTCGATCAGCGT 105754
>seq366
Length=80546
Score = 131 bits (144), Expect = 5e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || || ||||||||||| || || ||||| || ||
Sbjct 27917 CATACCACCACGCAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGGATATTGTAGTC 27976
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || || |||||||| ||||| || || |||||||| ||||| || ||
Sbjct 27977 GGACAGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGG 28036
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| || || ||||||||||| || | || ||||| || || | || || | ||
Sbjct 28037 GGGAATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTC 28096
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTG 140718
|| || || || | ||||| ||||||| ||
Sbjct 28097 GACCTCGAGAGTGATGGTCTTGCCGGTTACTG 28128
>seq514
Length=36044
Score = 125 bits (138), Expect = 2e-23
Identities = 261/389 (67%), Gaps = 0/389 (0%)
Strand=Plus/Plus
Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552
||||||||||| | || || || || || ||| ||||| || || || || |||
Sbjct 17415 ATTGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTTACCCCCGAGGAGATCTCCTCTATG 17474
Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612
||| | | || ||| || | ||||| | || | ||| || || | | |||
Sbjct 17475 GTTCTGATCAAGATGCGTGAGACCGCTGAGTCGTACCTTGGTACCACCGTTAACAACGCT 17534
Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672
||||| ||||| || ||||| || || ||| | |||||| || || || || | ||
Sbjct 17535 GTTATCACTGTTCCTGCCTACTTCAACGATTCTCAGCGTCAGGCTACCAAGGACTCCGGT 17594
Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732
||||| || | ||||| || | || ||||| || |||||||| || || |||||
Sbjct 17595 CTTATTGCCGGTCTGAATGTCCTGCGTATCATTAACGAGCCCACTGCCGCTGCCATTGCC 17654
Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792
|| || |||||||| | | || || || | || || || ||| | ||||||
Sbjct 17655 TACGGTCTTGATAAGAAGGTCGAGGGTGAGCGCAACGTCCTGATCTTCGATCTGGGTGGT 17714
Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852
|| ||||| ||||| || || || || |||| || || || || || || || | |||
Sbjct 17715 GGCACTTTCGATGTCTCGCTGCTGACCATTGAGGATGGTATCTTCGAGGTCAAGTCCACT 17774
Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGA 349881
|| ||||| || ||| | ||||| |||||
Sbjct 17775 GCCGGTGACACTCATTTGGGTGGTGAAGA 17803
>seq541
Length=36825
Score = 116 bits (128), Expect = 1e-20
Identities = 224/328 (68%), Gaps = 2/328 (1%)
Strand=Plus/Plus
Query 378120 ATCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGT 378179
||||| ||||| || || || ||||||||| || | || | ||| | |||||
Sbjct 10269 ATCAAGACCATCCTCACCGTACAGGAATTGAACGATATCTCCTAGAGAGTTACGAACAGT 10328
Query 378180 CATATCATATCTAACCATTAA-ATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAAC 378238
|||||| || | || ||| |||||| | || || | || || || ||| || |
Sbjct 10329 TCCATCATA-CTTAGCACTAACATCTTCAAGAGCCTTGACTAGACGACGTTGAATGTATC 10387
Query 378239 CAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGA 378298
|||||| ||| || || ||||||||||| ||||| |||||||| |||| || ||||
Sbjct 10388 CAGTTTCGGCAGTCTTGACAGCAGTATCAATCAAACCTTCACGACCAGCCATGGCGTGGA 10447
Query 378299 AGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGC 378358
|||| || || | || ||||| |||| || | || | || | || || | ||
Sbjct 10448 AGAAGAACTCGCTTGGCGTAAGACCACGAAGGTAAGAGTTTTCGACGAAGCCACGTGACT 10507
Query 378359 CTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAA 378418
| || |||| ||||| ||| || | ||||| | ||||| | || || ||| | ||||
Sbjct 10508 CGGGAGAATAATCATCTTTGGTGAAGTGAGGAAGCGTACGGTACTTGAATCCAAAGGGAA 10567
Query 378419 TTCGTTTTCCATCAACATTCTGTTGACC 378446
| || ||||| || || | ||||||||
Sbjct 10568 TACGCTTTCCTTCGACGATTTGTTGACC 10595
Score = 96.9 bits (106), Expect = 1e-14
Identities = 118/158 (75%), Gaps = 5/158 (3%)
Strand=Plus/Plus
Query 377439 TGATAATATTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACC 377498
||| ||| || |||||| || || |||||| | ||||| ||| ||||| | |||||
Sbjct 9566 TGAGAAT-TTCCTTCAAA-CGGGGGACACCAAGAGTAACGTTC---TTAGAAGACACACC 9620
Query 377499 AGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGC 377558
|||||| |||||||| || || || | || |||| ||||| ||||| ||||| || ||
Sbjct 9621 AGCAAAATGGAAAGTGTTGAGCGTCATCTGCGTAGCAGGCTCTCCAATGGACTGAGCAGC 9680
Query 377559 AATAACGCCAACCATTTCTCCAGGATTGACAATAGCCT 377596
| ||||||||||| || || || ||| || |||||
Sbjct 9681 CAGCACGCCAACCATCTCACCGGGGCTGATAAAAGCCT 9718
>seq355
Length=31638
Score = 107 bits (118), Expect = 6e-18
Identities = 153/213 (72%), Gaps = 7/213 (3%)
Strand=Plus/Plus
Query 140528 AACAAGATGAAGAGTA-GACT--CTTTTTGAATATTATAATCAGATAATGTTCGCCCATC 140584
|||||||||| || |||| | || || || || || || || | || || |||||
Sbjct 6258 AACAAGATGA----TATGACTGACCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 6313
Query 140585 TTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATC 140644
|| || || || ||||| ||||| || || || ||||| || ||||| || || |||||
Sbjct 6314 CTCTAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATC 6373
Query 140645 CTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGT 140704
||| || |||| || ||||| || || | || || | ||||| ||||| || | ||
Sbjct 6374 CTGGATCTTAGACTTGACATTGTCGATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGT 6433
Query 140705 CTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || || || || || || |||||||||||
Sbjct 6434 CTTACCCGTAAGGGTCTTGACGAAAATCTGCAT 6466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515236674838139
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |