Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq142 288 1e-72 seq381 89.7 6e-13 >seq142 Length=98154 Score = 288 bits (318), Expect = 1e-72 Identities = 524/757 (69%), Gaps = 10/757 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGAC-GACTACACGCGTGTCCGTGAGACGTAC 53251 ||||||| || ||| | |||||| || ||| | | || ||||| | ||||||||| Sbjct 2181 TCATGCGTGTTGCCGTCGGTATCTGGGGCGACCGTGTCGAC-CGTGTGCTCGAGACGTAC 2239 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 ||| ||| | ||| || || |||||| | || || |||||||||||||| ||| Sbjct 2240 AACTACATGTCCAGTAAGCTTTTCACACACGCCTCACCTACGCTGTTCAACGCTGGCACG 2299 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 || | ||| | ||| |||||| |||| | |||||||||||| || || || Sbjct 2300 CCGCAGGCCCAGCTATCGTCATGCTTCTTGGTCGACATGAAGGATGACAGCATTGAGGGT 2359 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 |||||||| ||||| ||| ||||| ||||||||| | | |||||||| || | Sbjct 2360 ATCTACGATACGCTGAAGACTTGTGCTATGATCTCCAAGATGGCCGGTGGTATTGGCCTG 2419 Query 53432 CACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489 || || | ||| ||| || | |||| | || || || |||||| | Sbjct 2420 AACG--TCCACCGTATCCGCGCCACCGGCTCGTACATTGCTGGCACTAACGGCACGTCAA 2477 Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 | || |||||||||||||| ||||||||||||||||| ||||| || || ||||||||| Sbjct 2478 ACGGCATCGTGCCTATGCTGCGCGTCTTCAACAACACCGCCCGCTATGTTGACCAGGGTG 2537 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 | |||||| || | || || |||||||| ||||||||||| ||||| | | | Sbjct 2538 GCAACAAGCGCCCTGGAGCCTTTGCTATCTACCTAGAGCCGTGGCATGCCGATGTCTTCG 2597 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTA 53669 |||| ||||| || || ||| || || | || ||||| || ||| |||||||| Sbjct 2598 AGTTCCTCGACCTACGCAAGAACCACGGCAAGGAGGAGATTCGTGCCCGCGACCTGTTCC 2657 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729 ||| ||||||||||| ||||| |||||| | || |||||| ||| | ||| | Sbjct 2658 TAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAAGAACGCCAACTGGACAC 2717 Query 53730 TGATGTGCCCGAACGAGTGCCCCGGCCT-CCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788 | |||||||| |||||||||||||| || | | || ||||||||| ||||| | | Sbjct 2718 TCATGTGCCCCAACGAGTGCCCCGGTCTGGCCGACTG-CTACGGTGACGAGTTCGAGGCT 2776 Query 53789 ATGTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGT 53847 |||| | ||||| || | |||||||| | ||||||| | || | Sbjct 2777 CTGTACGAAAAGTACG-AGAGCGAGGGCCGCGGTCGCCTCACCATCAAGGCCCAGAAGCT 2835 Query 53848 ATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGA 53907 |||| | || ||||| || ||| ||||| |||| |||| |||| |||||||| Sbjct 2836 ATGGTACGCCATCCTTGAGGCCCAAACCGAGACCGGAAACCCGTTCATGCTGTACAAGGA 2895 Query 53908 TTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944 | | |||| ||||||||||||||||||| | ||| Sbjct 2896 TGCCTGCAACAGGAAGAGCAACCAGAAGAACCTGGGC 2932 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 || |||||||| || | |||||| ||||| ||||| ||||||||| |||| | ||||| Sbjct 3758 GCCGATCGTGGCGCTTTCATCGATCAGTCGCAGTCGCTGAACATCCACATGAAAGATCCT 3817 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 | ||| ||| | | | ||||||||| || |||||| || |||||||| || Sbjct 3818 ACCATGGGCAAAATCACCAGCATGCACTTTGCTGGTTGGAAGCTTGGTCTCAAGACTGGC 3877 Query 55907 ATGTACTATCTGCGGACCC 55925 |||||||||||||| |||| Sbjct 3878 ATGTACTATCTGCGTACCC 3896 Score = 89.7 bits (98), Expect = 6e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 || ||||| |||||| | || || ||||| || || ||||| |||| ||| |||||||| Sbjct 3452 CGAAACTCGCTGCTCCTAGCCCCCATGCCGACTGCTTCGACCTCTCAAATCCTGGGCAAC 3511 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACC 55580 |||||| |||||||| ||||| |||||||||||| Sbjct 3512 AACGAGTGCTTCGAGCCCTACACTTCCAACATCTACC 3548 >seq381 Length=50754 Score = 89.7 bits (98), Expect = 6e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCA 152172 ||||| | ||||||||| |||||||| ||| | | || || ||| ||| ||||||| Sbjct 6739 TTGTTTGAGCCCACGAAGTTCTGAGCTAAACTGATGATAGTCTGCTGTAGAGACGCTTCA 6798 Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232 ||||| || || || ||||| | | || || || || |||| | |||||||| || Sbjct 6799 CCGTGTTGGTAGGCAGTCTGGCCAGAGACATAACCAGCTAACTCAACGACCTTCATATCT 6858 Query 152233 GTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTG 152276 | | | ||| |||||| |||||| || || |||||||| || Sbjct 6859 TTTATGATGTTACTCTTGAAACAGGCATAGATAACCTTGCGTTG 6902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547209754897400