Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq142 288 1e-72
seq381 89.7 6e-13
>seq142
Length=98154
Score = 288 bits (318), Expect = 1e-72
Identities = 524/757 (69%), Gaps = 10/757 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGAC-GACTACACGCGTGTCCGTGAGACGTAC 53251
||||||| || ||| | |||||| || ||| | | || ||||| | |||||||||
Sbjct 2181 TCATGCGTGTTGCCGTCGGTATCTGGGGCGACCGTGTCGAC-CGTGTGCTCGAGACGTAC 2239
Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
||| ||| | ||| || || |||||| | || || |||||||||||||| |||
Sbjct 2240 AACTACATGTCCAGTAAGCTTTTCACACACGCCTCACCTACGCTGTTCAACGCTGGCACG 2299
Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
|| | ||| | ||| |||||| |||| | |||||||||||| || || ||
Sbjct 2300 CCGCAGGCCCAGCTATCGTCATGCTTCTTGGTCGACATGAAGGATGACAGCATTGAGGGT 2359
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|||||||| ||||| ||| ||||| ||||||||| | | |||||||| || |
Sbjct 2360 ATCTACGATACGCTGAAGACTTGTGCTATGATCTCCAAGATGGCCGGTGGTATTGGCCTG 2419
Query 53432 CACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489
|| || | ||| ||| || | |||| | || || || |||||| |
Sbjct 2420 AACG--TCCACCGTATCCGCGCCACCGGCTCGTACATTGCTGGCACTAACGGCACGTCAA 2477
Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549
| || |||||||||||||| ||||||||||||||||| ||||| || || |||||||||
Sbjct 2478 ACGGCATCGTGCCTATGCTGCGCGTCTTCAACAACACCGCCCGCTATGTTGACCAGGGTG 2537
Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609
| |||||| || | || || |||||||| ||||||||||| ||||| | | |
Sbjct 2538 GCAACAAGCGCCCTGGAGCCTTTGCTATCTACCTAGAGCCGTGGCATGCCGATGTCTTCG 2597
Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTA 53669
|||| ||||| || || ||| || || | || ||||| || ||| ||||||||
Sbjct 2598 AGTTCCTCGACCTACGCAAGAACCACGGCAAGGAGGAGATTCGTGCCCGCGACCTGTTCC 2657
Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729
||| ||||||||||| ||||| |||||| | || |||||| ||| | ||| |
Sbjct 2658 TAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAAGAACGCCAACTGGACAC 2717
Query 53730 TGATGTGCCCGAACGAGTGCCCCGGCCT-CCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788
| |||||||| |||||||||||||| || | | || ||||||||| ||||| | |
Sbjct 2718 TCATGTGCCCCAACGAGTGCCCCGGTCTGGCCGACTG-CTACGGTGACGAGTTCGAGGCT 2776
Query 53789 ATGTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGT 53847
|||| | ||||| || | |||||||| | ||||||| | || |
Sbjct 2777 CTGTACGAAAAGTACG-AGAGCGAGGGCCGCGGTCGCCTCACCATCAAGGCCCAGAAGCT 2835
Query 53848 ATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGA 53907
|||| | || ||||| || ||| ||||| |||| |||| |||| ||||||||
Sbjct 2836 ATGGTACGCCATCCTTGAGGCCCAAACCGAGACCGGAAACCCGTTCATGCTGTACAAGGA 2895
Query 53908 TTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944
| | |||| ||||||||||||||||||| | |||
Sbjct 2896 TGCCTGCAACAGGAAGAGCAACCAGAAGAACCTGGGC 2932
Score = 98.7 bits (108), Expect = 1e-15
Identities = 105/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846
|| |||||||| || | |||||| ||||| ||||| ||||||||| |||| | |||||
Sbjct 3758 GCCGATCGTGGCGCTTTCATCGATCAGTCGCAGTCGCTGAACATCCACATGAAAGATCCT 3817
Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906
| ||| ||| | | | ||||||||| || |||||| || |||||||| ||
Sbjct 3818 ACCATGGGCAAAATCACCAGCATGCACTTTGCTGGTTGGAAGCTTGGTCTCAAGACTGGC 3877
Query 55907 ATGTACTATCTGCGGACCC 55925
|||||||||||||| ||||
Sbjct 3878 ATGTACTATCTGCGTACCC 3896
Score = 89.7 bits (98), Expect = 6e-13
Identities = 78/97 (80%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|| ||||| |||||| | || || ||||| || || ||||| |||| ||| ||||||||
Sbjct 3452 CGAAACTCGCTGCTCCTAGCCCCCATGCCGACTGCTTCGACCTCTCAAATCCTGGGCAAC 3511
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACC 55580
|||||| |||||||| ||||| ||||||||||||
Sbjct 3512 AACGAGTGCTTCGAGCCCTACACTTCCAACATCTACC 3548
>seq381
Length=50754
Score = 89.7 bits (98), Expect = 6e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCA 152172
||||| | ||||||||| |||||||| ||| | | || || ||| ||| |||||||
Sbjct 6739 TTGTTTGAGCCCACGAAGTTCTGAGCTAAACTGATGATAGTCTGCTGTAGAGACGCTTCA 6798
Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232
||||| || || || ||||| | | || || || || |||| | |||||||| ||
Sbjct 6799 CCGTGTTGGTAGGCAGTCTGGCCAGAGACATAACCAGCTAACTCAACGACCTTCATATCT 6858
Query 152233 GTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTG 152276
| | | ||| |||||| |||||| || || |||||||| ||
Sbjct 6859 TTTATGATGTTACTCTTGAAACAGGCATAGATAACCTTGCGTTG 6902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547209754897400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |