Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq142 279 6e-70 seq366 181 1e-40 seq355 136 5e-27 seq425 104 3e-17 seq24 102 9e-17 >seq142 Length=98154 Score = 279 bits (308), Expect = 6e-70 Identities = 851/1307 (65%), Gaps = 34/1307 (3%) Strand=Plus/Minus Query 80374 CGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGA 80433 ||||| | || | ||| | |||||| ||||| || ||||||||| || ||||| ||| Sbjct 3555 CGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGGATTTGA 3496 Query 80434 GCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTG 80493 | || || |||||||| ||| | | | ||| || || |||| ||||||| |||| Sbjct 3495 GAGGTCGAAGCAGTCGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCGTGCTGCTTG 3436 Query 80494 ATATCCTCGCGCAAATCTGACCAAAAATCAACCCCAA----CGCTG----TGACC--CCA 80543 || | || | ||| | | || |||| ||||| |||| ||| Sbjct 3435 ATCTGTTC-------TTTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTGACATTCCA 3383 Query 80544 CATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCC 80603 ||||||| ||||| ||||| | ||| | ||||| ||| | | ||| ||| | ||| Sbjct 3382 CATGTCGAACTGCAGAATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCC 3323 Query 80604 CTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGAC 80663 || |||| || | ||| ||||| | | ||||| ||||| || ||| ||| || | Sbjct 3322 TTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAAT 3263 Query 80664 GCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACAC 80723 ||| |||| ||| |||| | || || | || || | | ||| | Sbjct 3262 CTGCTTATTCAGCGTGCGGGCCTCGGCAGACTCAAAGGGCATGCGTAGAGCTAGGAAGGC 3203 Query 80724 GTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGC 80783 || || || |||||||| || | | || |||||||||||| | || | || Sbjct 3202 ATCGGCTAGACCCTGAACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGC 3143 Query 80784 CTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCG 80843 ||| || | || ||| | || ||||||| ||||||||||||||| || ||| Sbjct 3142 CTCGGGCACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTT 3083 Query 80844 TGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT-------TC-ACAAATGCC 80895 || | || || || ||||| ||||| | | | ||| | || ||||| | | Sbjct 3082 GGTGATCTCGTGCAGCTTCTGGAAGTCATACTCG--CCCTTGTTGTAATCGACAAACGAC 3025 Query 80896 GGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACG 80955 || ||| ||| || ||||| |||||||| || || || |||| | |||||| | Sbjct 3024 GGTAGGGCCAGCGAGGCCAGGTTGCACACAGCAACTTCATCAGGGGCGCAGTACTCGATG 2965 Query 80956 ATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCG 81015 || || ||||||| || || ||| || |||||||| |||||||| ||| | Sbjct 2964 ATCTCGGTGCACAGGTTGGAGCTGCGAATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTG 2905 Query 81016 TTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATG 81075 ||||| || |||||||| |||| ||||| | ||||||||| || | || |||||| Sbjct 2904 TTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCAAGGATG 2845 Query 81076 GCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTG 81135 |||| ||| | || | ||||||| ||| ||| ||| | | ||||| Sbjct 2844 GCGTACCATAGCTTCTGGGCCTTGATGGTGAGGCGACCGCGGCCCTCGCTCTCGTACTTT 2785 Query 81136 GCGTAAGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGG 81194 |||| | ||||||| | |||||| | ||| | | || | ||||||||||| || Sbjct 2784 TCGTACAGAGCCTCGAACTCGTCACCGTAGCAGT-CGGCCAGACCGGGGCACTCGTTGGG 2726 Query 81195 GCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCA 81254 |||||| || ||||| || || ||||| ||| ||||||||| ||| || ||||| Sbjct 2725 GCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCA 2666 Query 81255 GAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTC 81314 ||||| ||||||||||||| || |||||| | || ||||| ||| | || Sbjct 2665 CAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTC 2606 Query 81315 GAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG 81374 ||| || || | || || |||||||| ||||| || || | || | | || ||| Sbjct 2605 GAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCG 2546 Query 81375 ---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGAT 81431 ||||||||||| || || ||||| || ||| || || |||| |||||| | Sbjct 2545 CTTGTTGCCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATAGGCAC 2486 Query 81432 GATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCT 81491 ||| || | |||| ||||| || || | || ||| || ||||||| | | Sbjct 2485 GATGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTG 2426 Query 81492 GATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTC 81551 || || || || ||||| | | ||| || ||| |||||| |||| || || Sbjct 2425 GACGTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATC 2366 Query 81552 ATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGG 81611 || || ||||| ||||| || | |||||||| | |||||| || || | ||| || Sbjct 2365 GTAGATACCCTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTG-GG 2307 Query 81612 GCT-TTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAA 81657 || | ||| || |||||||| || || | ||||| ||||| Sbjct 2306 CCTGCGGCGTGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAAA 2260 Score = 93.3 bits (102), Expect = 5e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| | || ||||||||||||||||| |||||||| || |||||| || | |||| Sbjct 3900 GCCTGGGTACGCAGATAGTACATGCCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGC 3841 Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151 || ||| || | | || || | | |||| ||||||||| ||||| |||||| Sbjct 3840 ATGCTGGTGATTTTGCCCATGGTAGGATCTTTCATGTGGATGTTCAGCGACTGCGACTGA 3781 Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTT 80182 ||||||||| |||||||| || ||||||| Sbjct 3780 TCGATGAAAGCGCCACGATCGGCGGCCATTT 3750 >seq366 Length=80546 Score = 181 bits (200), Expect = 1e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || ||||| || || || |||||||||||||| | Sbjct 27550 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 27491 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || | || ||||| || |||||||| || ||||| || ||| Sbjct 27490 GATACTATTGACAATGTCAAATCGAAGATTCAAGATAAGGAGGGTATCCCTCCGGATCAG 27431 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| |||||||| || ||||| || ||||||| |||||||| | ||||| || Sbjct 27430 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAAC 27371 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | |||||||| || || || ||||| || ||||||| || || || || Sbjct 27370 ATTCAAAAGGAGTCTACCCTACATCTGGTTCTGCGTCTGCGTGGAGGCCA 27321 Score = 168 bits (186), Expect = 8e-37 Identities = 159/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || ||||| ||||| ||||| || | ||| | ||| | ||| | Sbjct 28123 ACCGGCAAGACCATCACTCTCGAGGTCGAGTCTTCCGACACCATCGACAATGTCAAGTCG 28064 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || |||||||| |||||||| ||||| ||||||||||||||||||||||| || || ||| Sbjct 28063 AAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAGCAGCGTCTAATTTTCGCCGGAAAG 28004 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||| ||||| | ||| ||||| | ||||| ||| |||| ||||| || ||||| || Sbjct 28003 CAACTTGAGGACGGTCGCACCCTGTCCGACTACAATATCCAGAAGGAGTCTACTCTCCAC 27944 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || ||||| Sbjct 27943 CTGGTCCTCCGCCTGCGTGGTGG 27921 >seq355 Length=31638 Score = 136 bits (150), Expect = 5e-27 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| ||||| || ||||| || || |||||||||||||| Sbjct 6466 ATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTTGAGTCCTCA 6407 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| |||| || ||||| |||||||| ||||| || || || Sbjct 6406 GACACCATCGACAATGTCAAGTCTAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAA 6347 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| ||||| || ||||||| || ||||| | ||||| || Sbjct 6346 CAGCGCCTGATCTTCGCTGGCAAGCAGCTAGAGGATGGCCGCACCCTGTCCGACTACAAC 6287 Query 27586 GTCCAAAAGG 27595 |||| |||| Sbjct 6286 ATCCAGAAGG 6277 >seq425 Length=119061 Score = 104 bits (114), Expect = 3e-17 Identities = 303/456 (66%), Gaps = 18/456 (4%) Strand=Plus/Minus Query 64708 TTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTC 64767 |||| |||||| || |||||||| || || || || ||||||||||| | || Sbjct 45732 TTTGCTCAGCGCCTAATCGCTTTTGCTGCCGTCGAGGGCATCTTCTTTTCTGGAGCCTTT 45673 Query 64768 TGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAG 64827 ||||| || ||||| ||||| || |||||||| || ||| | ||||| |||||| Sbjct 45672 GCCTCTATCTTTTGGCTGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCTAACGAG 45613 Query 64828 CTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGC--GGTTACCCTGTTCAGCCACC 64885 ||||| || || || ||||| || ||| || ||||| | || ||||| ||||| Sbjct 45612 CTGATTTCCCGTGATGAGGGTCTGCACACTGACTTTGCCTGCCTA--TTGTTCTCCCACC 45555 Query 64886 TCAAGGACAAACCATCACATGGGACTATAATTGA-TATAGTAAAATCG--GCTGTAGAAA 64942 | || || || | || || || | |||| | | | | || || || | | Sbjct 45554 TGAACAAC-CGCCCTGGCAAGGAAC--TTGTTGAGCAAATCATCACCGACGCCGTCGTCA 45498 Query 64943 TTGAAAAGGAATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATA 65002 |||| ||||| ||| | |||| || ||||| || || | |||||||| | || || Sbjct 45497 TTGAGAAGGAGTTCCTGACTGAGGCTCTTCCTTGCGGTTTACTCGGCATGAACGCTGACC 45438 Query 65003 AGATGAAACAGTATATCGAATTTGTAGCAGATCGCCTGCTTACT-CAGTTTGGTA---TT 65058 |||||| |||||||| || || || || || || || |||| | |||| | Sbjct 45437 TGATGAAGCAGTATATTGAGTTCGTTGCCGACCGTCT-CTTAGTGGCCCTTGGCAACGAC 45379 Query 65059 AAGCCCTACTGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGG 65118 ||| ||| | | || | || || || |||| ||||||| || |||| ||| Sbjct 45378 AAGGTGTACCG---TGCTACCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGGGGGC 45322 Query 65119 AAGACTAACTTTTTTGAAAAGAGGGTAGGTGATTAC 65154 ||||| |||||||| || || | || ||||| ||| Sbjct 45321 AAGACCAACTTTTTCGAGAAACGTGTTGGTGACTAC 45286 >seq24 Length=141979 Score = 102 bits (112), Expect = 9e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || ||||| ||||| || | || Sbjct 81089 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATC 81148 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || || ||||||||||| ||||| || ||||| ||||| || Sbjct 81149 GACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCTG 81208 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || ||||| ||||| || ||||||| || || | | ||||| || |||| ||| Sbjct 81209 ATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTTTGTCTGACTACAACATCCAGAAG 81268 Query 27595 G 27595 | Sbjct 81269 G 81269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570303891332560