Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq83 87.8 2e-12
>seq83
Length=83120
Score = 87.8 bits (96), Expect = 2e-12
Identities = 192/280 (69%), Gaps = 6/280 (2%)
Strand=Plus/Plus
Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381
|| || ||||||||||||| |||| || || || || || |||| ||| ||
Sbjct 80605 GGCGTCAAGATCTGGGACGGCAACGGTTCGCGCGAGTTCCTCGACA-GCGTAGGCCTTGG 80663
Query 34382 TCTCGG-GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440
|| | | || | ||||| | ||||| || || || ||||| ||| | || || || ||
Sbjct 80664 TCACCGCGATGTCGGCGATCTAGGCCCTGTGTATGGCTTCCAATGGCGCCATTTCGGCGC 80723
Query 34441 GGAGTATCGGGGGAGCG-AAGCGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTAC 34498
||| || || | || || |||| ||| |||| ||||| | || ||||| |||| |
Sbjct 80724 GGAATA-CGTCGATGCTCAAACGGATTATACGGGCCAGGGCGTCGATCAGCTCGCAG-AG 80781
Query 34499 GTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAAC 34558
|| ||| | | ||||| ||||| |||| | | ||| | ||| |||||||||||
Sbjct 80782 GTCATCTATAAGCTGAAGACTAACCCATATGATCGTCGCATCATCATGAGCGCGTGGAAC 80841
Query 34559 CCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACA 34598
|| ||||||| ||||||||| || ||||| ||||
Sbjct 80842 CCTGCGGATCTCAAGAAGATGGCGCTGCCGCCGTGTCACA 80881
Score = 87.8 bits (96), Expect = 2e-12
Identities = 192/280 (69%), Gaps = 6/280 (2%)
Strand=Plus/Minus
Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806
|||| ||||| || ||||||||| ||||||| ||||||||||||| ||| | ||
Sbjct 80881 TGTGACACGGCGGCAGCGCCATCTTCTTGAGATCCGCAGGGTTCCACGCGCTCATGATGA 80822
Query 6807 TCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGC-AGCTGGTCCGCT 6865
| | | |||| ||||| ||||| | | ||| || | |||| ||||| || |
Sbjct 80821 TGCGACGATCATATGGGTTAGTCTTCAGCTTATAGATGACCT-CTGCGAGCTGATCGACG 80763
Query 6866 CCCTGTCCCGAATAGTCCGCTT-CGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTG 6924
||||| |||| ||| |||| || || | || || ||||| || || || | ||| ||
Sbjct 80762 CCCTGGCCCGTATAATCCGTTTGAGCATCGACG-TATTCCGCGCCGAAATGGCGCCATTG 80704
Query 6925 GAACCCGTAGACCGGGCCCAAGTCGCCCTCCTC-CCGAGATGGGAACCCCCGCTTGTCCA 6983
||| || || || ||||| | ||||| | || | | || || ||| |||| |
Sbjct 80703 GAAGCCATACACAGGGCCTAGATCGCCGACATCGCGGTGACCAAGGCCTACGC-TGTCGA 80645
Query 6984 GAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023
| || || || || |||| ||||||||||||| || ||
Sbjct 80644 GGAACTCGCGCGAACCGTTGCCGTCCCAGATCTTGACGCC 80605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448257284205360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |