Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq83 87.8 2e-12 >seq83 Length=83120 Score = 87.8 bits (96), Expect = 2e-12 Identities = 192/280 (69%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381 || || ||||||||||||| |||| || || || || || |||| ||| || Sbjct 80605 GGCGTCAAGATCTGGGACGGCAACGGTTCGCGCGAGTTCCTCGACA-GCGTAGGCCTTGG 80663 Query 34382 TCTCGG-GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440 || | | || | ||||| | ||||| || || || ||||| ||| | || || || || Sbjct 80664 TCACCGCGATGTCGGCGATCTAGGCCCTGTGTATGGCTTCCAATGGCGCCATTTCGGCGC 80723 Query 34441 GGAGTATCGGGGGAGCG-AAGCGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTAC 34498 ||| || || | || || |||| ||| |||| ||||| | || ||||| |||| | Sbjct 80724 GGAATA-CGTCGATGCTCAAACGGATTATACGGGCCAGGGCGTCGATCAGCTCGCAG-AG 80781 Query 34499 GTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAAC 34558 || ||| | | ||||| ||||| |||| | | ||| | ||| ||||||||||| Sbjct 80782 GTCATCTATAAGCTGAAGACTAACCCATATGATCGTCGCATCATCATGAGCGCGTGGAAC 80841 Query 34559 CCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACA 34598 || ||||||| ||||||||| || ||||| |||| Sbjct 80842 CCTGCGGATCTCAAGAAGATGGCGCTGCCGCCGTGTCACA 80881 Score = 87.8 bits (96), Expect = 2e-12 Identities = 192/280 (69%), Gaps = 6/280 (2%) Strand=Plus/Minus Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806 |||| ||||| || ||||||||| ||||||| ||||||||||||| ||| | || Sbjct 80881 TGTGACACGGCGGCAGCGCCATCTTCTTGAGATCCGCAGGGTTCCACGCGCTCATGATGA 80822 Query 6807 TCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGC-AGCTGGTCCGCT 6865 | | | |||| ||||| ||||| | | ||| || | |||| ||||| || | Sbjct 80821 TGCGACGATCATATGGGTTAGTCTTCAGCTTATAGATGACCT-CTGCGAGCTGATCGACG 80763 Query 6866 CCCTGTCCCGAATAGTCCGCTT-CGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTG 6924 ||||| |||| ||| |||| || || | || || ||||| || || || | ||| || Sbjct 80762 CCCTGGCCCGTATAATCCGTTTGAGCATCGACG-TATTCCGCGCCGAAATGGCGCCATTG 80704 Query 6925 GAACCCGTAGACCGGGCCCAAGTCGCCCTCCTC-CCGAGATGGGAACCCCCGCTTGTCCA 6983 ||| || || || ||||| | ||||| | || | | || || ||| |||| | Sbjct 80703 GAAGCCATACACAGGGCCTAGATCGCCGACATCGCGGTGACCAAGGCCTACGC-TGTCGA 80645 Query 6984 GAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023 | || || || || |||| ||||||||||||| || || Sbjct 80644 GGAACTCGCGCGAACCGTTGCCGTCCCAGATCTTGACGCC 80605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448257284205360