Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq142 156 6e-33 seq425 140 5e-28 >seq142 Length=98154 Score = 156 bits (172), Expect = 6e-33 Identities = 1006/1600 (63%), Gaps = 27/1600 (2%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || ||||| || |||| | |||| | ||||| ||||||||||| ||||| || ||| Sbjct 3924 GTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATGCCAGTCTTGAGA 3865 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || || |||| || || |||||||| || | |||| ||||||| || Sbjct 3864 CCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTAGGATCTTTCATG 3805 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 || || |||| |||||| |||||||||||||| || | ||| || ||||||| | | Sbjct 3804 TGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCGGCCATTTGCACA 3745 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 | ||| || | |||||||||| ||| ||| | | ||||| || | || | Sbjct 3744 ACGGTGCGCTGGGAGATTTCCCAAACAGTCTTGTACAAGGCCTTGATGTCGGCAGGGATA 3685 Query 77022 TTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 | | | || ||||| ||||| || || || ||||| || |||| | Sbjct 3684 CTGGGAATGTTCTGAATCGAACCGTTGTCGCTGATGATGCGGTTCTTCATGGCATCGGAC 3625 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 || | || || | | || || || || || | || || || ||| Sbjct 3624 CAAAGACCGAGGTCGACTAGGTCACGTAGCAGCCAGGGGTTGACGACCTGGAACTCGCCA 3565 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | ||| || | ||| ||| || || || || || || | | || ||||| ||| Sbjct 3564 GCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTTGCCC 3505 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | ||||||| || |||||||| ||||| || || | | | |||| | ||| Sbjct 3504 AGGATTTGAGAGGTCGAAGCAGTCGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCG 3445 Query 77259 TG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATC--TGAAGGTACAACA 77315 || || | |||| | ||||| || | ||| ||||| || || || ||| ||| Sbjct 3444 TGCTGCT-TGATCTGTTCTTTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTG--ACA 3388 Query 77316 TCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAA 77375 | ||| | ||| | || ||||| || | | || || || | ||| || || Sbjct 3387 TTCCACATGTCGAACTGCAGAATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAG 3328 Query 77376 GGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCG 77435 | ||||| || | ||| | || || || | || ||| || || || ||| Sbjct 3327 GTGCCTTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCG 3268 Query 77436 AAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATA 77495 ||||||| |||||| || | || || | ||||| || ||| | | Sbjct 3267 AAAATCTGCTTATTCAGCGTGCGGGCCTCGGCAGACTCAAAGGGCATGCGTAGAGCTAGG 3208 Query 77496 AAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 77555 |||||||| |||| |||||||| |||| |||||||| | || | | ||||| | Sbjct 3207 AAGGCATCGGCTAGACCCTGAACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTA 3148 Query 77556 TTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACT 77615 | ||| || || | ||||||||||| | ||| || || || || || | || || Sbjct 3147 TGAGCCTCGGGCACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACG 3088 Query 77616 ACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA-TCTTCCATCTA-TAA----CAAAC 77669 || || | || | || || | || ||| | || || | | ||| ||||| Sbjct 3087 ACCTTGGTGATCTCGTGCAGCTTCTGGAAGTCATACTCGCCCTTGTTGTAATCGACAAAC 3028 Query 77670 -ATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTG 77728 | | | | || | || || || || || || || || |||| || | | || | Sbjct 3027 GACGGT-AGGGCCAGCGAGGCCAGGTTGCACACAGCAACTTCATCAGGGGCGCAGTACTC 2969 Query 77729 TATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTT 77788 || |||||||| || || || | ||||||||||| || | ||||||||||| Sbjct 2968 GATGATCTCGGTGCACAGGTTGGAGCTGCGAATAGTGCCCAGGTTCTTCTGGTTGCTCTT 2909 Query 77789 TTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGAT 77848 | ||||| | ||||| || || || ||||| | ||||| || | || | || | Sbjct 2908 CCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCAAG 2849 Query 77849 AATAGATTTCCAGACGACTCTAG-CTTTTATCATAGATTTGTATCGC--CTCTCTCTTTC 77905 || | | ||| | | ||| | | || || | || | | ||| | ||| || || Sbjct 2848 GATGGCGTACCATA-GCTTCTGGGCCTTGATGGT-GAGGCG-ACCGCGGCCCTCGCTCTC 2792 Query 77906 ATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCAT 77963 || || ||| | |||| || || || || || | || ||| || ||||| Sbjct 2791 GTACTTTTCGTACAGAGCC--TCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCAC 2734 Query 77964 TCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCA 78023 || || |||||||| | || ||||| | | | || || || ||||| || || || Sbjct 2733 TCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCG 2674 Query 78024 GGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTT 78083 || ||||| || || | || || || |||| | | || || || || ||||| Sbjct 2673 GGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTG 2614 Query 78084 TTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACT 78143 || ||||| ||||| | | ||| | |||||| || ||||| || || || | || Sbjct 2613 CGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCT 2554 Query 78144 CCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAAC 78203 ||||| || || || || ||||| || | ||| | ||||||||| || | || | || | Sbjct 2553 CCAGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGC 2494 Query 78204 ATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGA 78263 || || | || ||||| || || || || || |||| ||| || || | ||||| Sbjct 2493 ATAGGCACGATGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGG 2434 Query 78264 ATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTC 78323 ||| | | | || || || || |||||||| || || | ||| ||| ||| Sbjct 2433 ATACGGTGGACGTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTC 2374 Query 78324 AATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363 | ||||||||||||||||| || ||||||||| |||||| Sbjct 2373 AGCGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGT 2334 >seq425 Length=119061 Score = 140 bits (154), Expect = 5e-28 Identities = 375/569 (66%), Gaps = 12/569 (2%) Strand=Plus/Plus Query 48132 AACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAA 48191 |||| || || ||||| ||| || ||||| ||||| | ||| | ||||||||| Sbjct 45563 AACAATAGGCAGGCAAAGTCAGTGTGCAGACCCTCATCACGGGAAATCAGCTCGTTAGAA 45622 Query 48192 AATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251 || || || |||||||| || ||||| || |||||||| || | || || | |||| Sbjct 45623 AAGGTCAGGCCGGGCATCAGACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCTCCA 45682 Query 48252 GAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTC- 48310 |||||||| ||||| || ||||| ||||| ||| | || | || | || | | ||| Sbjct 45683 GAAAAGAAGATGCCCTCGACGGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCT 45742 Query 48311 --GTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCT 48368 || | ||||| | ||||| || || || || || || || || || Sbjct 45743 CTGTCGCAGATCCATTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCA 45802 Query 48369 ATAGCATTAAAGAGAAA---GtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAA 48425 ||||| || || || | | | || || || || | |||||||| || || Sbjct 45803 ATAGCGTTGAACAGGTACGTGCGCTGGGCA-GGC--TCCTTGATATAAGTATCGATCAAC 45859 Query 48426 AGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTC 48485 | | || | |||||||| || || || || ||||| || || || || || | Sbjct 45860 AAAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGA 45919 Query 48486 GCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCA 48545 || || | |||||| ||||| | | || || ||| ||| ||||| || || || ||| Sbjct 45920 GCCTCAGGGATCTGGACCTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCA 45979 Query 48546 TCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCG---TTGGAAGTC 48602 ||| |||||||| || || | | || || || || | ||| |||| | | Sbjct 45980 TCAGAGGCAGCAAAGAAGGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGC 46039 Query 48603 AGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGAT 48662 | || |||||||| | || |||||| |||| ||| | || ||||| ||||| || || Sbjct 46040 CGGTTGTTCCAGTCGTGGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAG 46099 Query 48663 GCCTCTGCTTTTTTATACATATTCCATAT 48691 ||||| || || |||||||| | ||| || Sbjct 46100 GCCTCAGCCTTCTTATACATCTGCCAGAT 46128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694660872092320