Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq425 159 5e-34 seq142 113 6e-20 >seq425 Length=119061 Score = 159 bits (176), Expect = 5e-34 Identities = 551/854 (65%), Gaps = 18/854 (2%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 || ||||| ||||| ||||||||||||||||| || || ||||| ||| || || || Sbjct 45281 TTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTC 45340 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || || || || || ||| || || | || | || | | | Sbjct 45341 TCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGTTGCCAAGGGCCACTAAG 45400 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 || | || |||||||| || |||||| ||||||| ||| ||||| || |||| Sbjct 45401 AGACGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCC---GAGT 45457 Query 46519 TTGACCG----GTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATAT 46574 |||| | |||||||| || || ||||| | ||||| ||| || || | || Sbjct 45458 AA-ACCGCAAGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGAT 45516 Query 46575 TATCGATGTT--ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACAT 46632 || || | || ||||| | || | | ||| || |||| || || Sbjct 45517 GATT--TGCTCAACAAGTTCCTTGCCAGGGCGGTTGTTCAGGTGGGAGAACAATAGGCAG 45574 Query 46633 GCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCA 46692 ||||| ||| || || || ||||| | ||| | ||||||||||| || || || Sbjct 45575 GCAAAGTCAGTGTGCAGACCCTCATCACGGGAAATCAGCTCGTTAGAAAAGGTCAGGCCG 45634 Query 46693 GGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATG 46752 ||||| || |||||||| |||||||| |||| || || | |||||||||||| ||| Sbjct 45635 GGCATCAGACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCTCCAGAAAAGAAGATG 45694 Query 46753 CCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATC 46809 || || || || || || |||| || | || | || | | || | | ||| Sbjct 45695 CCCTCGACGGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAGATC 45754 Query 46810 CACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAG 46869 || | ||||||| || || || || || || || || || ||||| || || Sbjct 45755 CATTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAAC 45814 Query 46870 AGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCT 46929 || | | | || || || | ||| ||||| || || | | || | || Sbjct 45815 AGGTACGTGCGCTGGGCAGGCTCCTTGATATAAGTATCGATCAACAAAGAGTAGGTCTCG 45874 Query 46930 GAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGT 46989 || || ||||| || || ||||| || || || || || | || |||| ||||| Sbjct 45875 GAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTGG 45934 Query 46990 ACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAA 47049 ||||| | | || || ||| || ||||| || || || |||||| |||||||| Sbjct 45935 ACCTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCATCAGAGGCAGCAAAG 45994 Query 47050 AATGCCAATACATGTTTAATAAAATATTTTTCATC---GGTAGTCAGTTTATTCCAGTCA 47106 || |||| | || || || || | || || |||| | | || |||||||| Sbjct 45995 AAGGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCCAGTCG 46054 Query 47107 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTA 47166 | || |||||| |||| ||| | || ||||| |||||||| || ||||| || || ||| Sbjct 46055 TGGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTTA 46114 Query 47167 TACATATTCCATAT 47180 ||||| | ||| || Sbjct 46115 TACATCTGCCAGAT 46128 >seq142 Length=98154 Score = 113 bits (124), Expect = 6e-20 Identities = 1004/1609 (62%), Gaps = 36/1609 (2%) Strand=Plus/Minus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| |||||||| ||||||| || || | | ||||| ||||||||||| ||||| | Sbjct 3929 CAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATGCCAGTCT 3870 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 | ||||| || |||| || || |||||||| || | |||| | ||||| Sbjct 3869 TGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTAGGATCTT 3810 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 || || || |||| |||||| |||||||||||||| || | ||| || ||||||| Sbjct 3809 TCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCGGCCATTT 3750 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 | || ||| || | |||||||||| ||| ||| | | ||||| || | | Sbjct 3749 GCACAACGGTGCGCTGGGAGATTTCCCAAACAGTCTTGTACAAGGCCTTGATGTCGGCAG 3690 Query 75612 GAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 | | | | | | || ||||| || ||| || || || ||||| || ||| Sbjct 3689 GGATACTGGGAATGTTCTGAATCGAACCGTTGTCGCTGATGATGCGGTTCTTCATGGCAT 3630 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728 | ||| | ||| || | | || || || || || | || || | Sbjct 3629 CGGACCAAAGACCGAGGTCGACTAGGTCACGTAGCAGCCAGGGGTTGACGACCTGGAACT 3570 Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788 | |||| ||| || | || ||| || || || || || || | | || |||| Sbjct 3569 CGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGT 3510 Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848 | |||| ||||||| || |||||||||||||| || || | | | |||| | Sbjct 3509 TGCCCAGGATTTGAGAGGTCGAAGCAGTCGGCATGGGGGCTAGGAGCAGCGAGTTTCGCA 3450 Query 75849 GACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGAT--CTGATGGTA 75905 ||| || || | |||| | ||||| || | ||| ||||| || | ||| ||| Sbjct 3449 CACCGTGCTGCT-TGATCTGTTCTTTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGT- 3392 Query 75906 CAACATCCCAGAGATCGTATTGTAGAATTCCGTTGC-TAGCATATGATCCATTATATGTT 75964 |||| ||| | ||| | || ||||| || |||| | || || || | ||| || Sbjct 3391 -GACATTCCACATGTCGAACTGCAGAATGCC-TTGCGAAACAGGAGAGCCCTCATAGGTC 3334 Query 75965 TCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATT 76024 ||| || || || | | ||| | ||||| || || || ||| || || Sbjct 3333 GAGTAGGTGCCTTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATG 3274 Query 76025 GTTTCGAAAATCTTCTTATTAAGATCTTGC--GCTTC--AAGACTATCAAAAGGATAATG 76080 || |||||||||| |||||| || | ||| || || |||| ||||| || | Sbjct 3273 GTCTCGAAAATCTGCTTATTCAG--CGTGCGGGCCTCGGCAGAC--TCAAAGGGCATGCG 3218 Query 76081 TAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 76140 || | | || ||||| ||||| |||||||| |||| |||||||| | || | | | Sbjct 3217 TAGAGCTAGGAAGGCATCGGCTAGACCCTGAACACCAACTCCAATAGGGCGGTGGCGCAT 3158 Query 76141 ATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200 |||| | | ||| || || | || |||||||| | || || || || || || Sbjct 3157 ATTGCTGTTATGAGCCTCGGGCACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTT 3098 Query 76201 TCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCAT-----CT 76255 | || || || || | || | || || | || ||| | | || | Sbjct 3097 GCGCACGACGACCTTGGTGATCTCGTGCAGCTTCTGGAAGTCATACTCGCCCTTGTTGTA 3038 Query 76256 ATC-ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATT 76314 ||| |||||| || || | || || || || || || || || |||| || Sbjct 3037 ATCGACAAACGACGGTAGGGCCAGCGAGGCCAGGTTGCACACAGCAACTTCATCAGGGGC 2978 Query 76315 GGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTG 76374 | || | || ||||| ||||| || || | ||||| || || || | || Sbjct 2977 GCAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGAATAGTGCCCAGGTTCTTCTG 2918 Query 76375 GTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTG 76434 ||||||||| |||| || | ||||| || || | ||||| |||| || || | || Sbjct 2917 GTTGCTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTG 2858 Query 76435 TGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGTATCGC--TT 76491 | || | || | | ||| | | ||| || || || | || | | ||| Sbjct 2857 GGCCTCAAGGATGGCGTACCATA-GCTTCTGGGCCTTGATGGT-GAGGCG-ACCGCGGCC 2801 Query 76492 CTCTCTTTCATA--TTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAA 76549 ||| || || || || ||| | | || || || || || || | || ||| | Sbjct 2800 CTCGCTCTCGTACTTTTCGTACAGAGCC--TCGAACTCGTCACCGTAGCAGTCGGCCAGA 2743 Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609 || || || || || || ||||| | || ||| | | | | || || || ||||| Sbjct 2742 CCGGGGCACTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATG 2683 Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 || || || || ||||| || || | || || || |||| | | || || || || Sbjct 2682 AACAGGTCGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCG 2623 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 ||||| || || |||||||| | | ||| | |||||| || ||||| || || Sbjct 2622 TGGTTCTTGCGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATA 2563 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | | || || || || || || ||||| || | ||| | ||| ||||| || | Sbjct 2562 GCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAG 2503 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849 || | || ||| || | |||||||| || || || || || |||| ||| || || Sbjct 2502 ACGCGCAGCATAGGCACGATGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAGCCG 2443 Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909 || || ||| | ||||| || || || ||||| || ||||| | |||| Sbjct 2442 GTGGCGCGGATACGGTGGACGTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCA 2383 Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGT 76958 || |||| || || ||||| ||||| || || |||||| |||||| Sbjct 2382 CAAGTCTTCAGCGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGT 2334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712926263636160