Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq366 131 4e-25 seq355 95.1 3e-14 >seq366 Length=80546 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| || |||||||| ||||| |||||||| |||| | || | ||||| Sbjct 27339 AGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCATCC 27398 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| || || || | |||||| |||| | ||| || ||||| ||| Sbjct 27399 TCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGGATACCCTCCTTATCT 27458 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || ||||||| | || | | || ||| ||| || ||||| || || ||| Sbjct 27459 TGAATCTTCGATTTGACATTGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATGGTT 27518 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||||||||| ||||||| ||||| Sbjct 27519 TTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 27550 Score = 96.9 bits (106), Expect = 8e-15 Identities = 137/191 (72%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || ||||||||||| || ||||| ||||| |||| | || | || || Sbjct 27935 GAGGACCAGGTGGAGAGTAGACTCCTTCTGGATATTGTAGTCGGACAGGGTGCGACCGTC 27994 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 || || ||||| |||||||| || || | ||||||||| | | || || ||||| Sbjct 27995 CTCAAGTTGCTTT--CCGGCGAAAATTAGACGCTGCTGGTCTGGGGGAATACCCTCCTTA 28052 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || ||||| || |||||| | || | | |||| ||| ||| || || ||||| || Sbjct 28053 TCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATG 28112 Query 152070 GTTTTGCCCGT 152080 || ||||| || Sbjct 28113 GTCTTGCCGGT 28123 >seq355 Length=31638 Score = 95.1 bits (104), Expect = 3e-14 Identities = 157/223 (70%), Gaps = 9/223 (4%) Strand=Plus/Plus Query 151890 CTGAGGA--CAAGATGAAGAGTA-GACT--CTTTTTGGATGTTGTAATCGGCTAAAGTTC 151944 ||||||| |||||||| || |||| | || ||||||||||| |||| | || | Sbjct 6251 CTGAGGAAACAAGATGA----TATGACTGACCTTCTGGATGTTGTAGTCGGACAGGGTGC 6306 Query 151945 TCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 ||||| ||||| || || |||||||| || | ||| || |||| | || || | Sbjct 6307 GGCCATCCTCTAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCT 6366 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| || || || || |||||| | || | | ||||||| ||| || ||||| | Sbjct 6367 CCTTATCCTGGATCTTAGACTTGACATTGTCGATGGTGTCTGAGGACTCAACCTCAAGGG 6426 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || || || ||||| || ||||| ||||| | |||||| || Sbjct 6427 TGATCGTCTTACCCGTAAGGGTCTTGACGAAAATCTGCATCTT 6469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153807302820623