Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq366 140 8e-28
seq355 127 5e-24
>seq366
Length=80546
Score = 140 bits (154), Expect = 8e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || |||||||| || ||||| |||||||| ||||| || || ||
Sbjct 27547 CAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCTGAT 27488
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || |||||| |||||||| || || || || ||||||||||| |||||
Sbjct 27487 ACTATTGACAATGTCAAATCGAAGATTCAAGATAAGGAGGGTATCCCTCCGGATCAGCAG 27428
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || || ||||| || ||||| || ||||| | || || |||| || ||| |
Sbjct 27427 CGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAACATT 27368
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
||||| || || || || ||||| ||| ||
Sbjct 27367 CAAAAGGAGTCTACCCTACATCTGGTTCTG 27338
Score = 104 bits (114), Expect = 6e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || || || ||||| |||||||| || || ||||||||||| || |||||
Sbjct 28123 ACCGGCAAGACCATCACTCTCGAGGTCGAGTCTTCCGACACCATCGACAATGTCAAGTCG 28064
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
||||||||||| || || || || || || |||||||| || || || |||||||||||
Sbjct 28063 AAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAGCAGCGTCTAATTTTCGCCGGAAAG 28004
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
|| || || || || | || || |||| || || |||| || || || || || ||
Sbjct 28003 CAACTTGAGGACGGTCGCACCCTGTCCGACTACAATATCCAGAAGGAGTCTACTCTCCAC 27944
Query 178125 CTTGT 178129
|| ||
Sbjct 27943 CTGGT 27939
>seq355
Length=31638
Score = 127 bits (140), Expect = 5e-24
Identities = 155/209 (74%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || || || || || ||||||||||| ||||| || |||||||
Sbjct 6463 CAGATTTTCGTCAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTTGAGTCCTCAGAC 6404
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || || || || || ||||| || ||
Sbjct 6403 ACCATCGACAATGTCAAGTCTAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAACAG 6344
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||||| || ||||| | || || |||| || ||| ||
Sbjct 6343 CGCCTGATCTTCGCTGGCAAGCAGCTAGAGGATGGCCGCACCCTGTCCGACTACAACATC 6284
Query 178104 CAAAAAGAATCA-ACACTGCATCTTGTTT 178131
|| || | ||| || ||||||||||
Sbjct 6283 CAGAAGG--TCAGTCATATCATCTTGTTT 6257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203717118978122
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |