Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq355 149 6e-31 seq24 129 5e-25 seq366 122 8e-23 >seq355 Length=31638 Score = 149 bits (164), Expect = 6e-31 Identities = 151/195 (77%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||||| |||||||| | || || ||||||||||| ||||| | Sbjct 6277 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCGAAGA 6336 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 ||||||||||||| |||| ||||| || |||||| ||| ||| || ||| || | Sbjct 6337 TCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTGT 6396 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | ||||| ||||| ||||| | || ||||| |||||||| || ||||| || Sbjct 6397 CG--ATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGAC 6454 Query 41851 GAAAATCTGCATGTT 41865 |||||||||||| || Sbjct 6455 GAAAATCTGCATCTT 6469 >seq24 Length=141979 Score = 129 bits (142), Expect = 5e-25 Identities = 140/183 (77%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||| || | ||||| | || || ||||||||||| ||||| | Sbjct 81269 CCTTCTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 81210 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||||||||||||||||| ||||| || ||||||||| ||| || ||| ||| | Sbjct 81209 TCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTT-GACGTTG 81151 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | ||||| ||||| ||||||| || || || ||||||||||| ||||| ||| Sbjct 81150 TCGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 81091 Query 41852 AAA 41854 ||| Sbjct 81090 AAA 81088 >seq366 Length=80546 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||||||| || || |||||| |||||||| |||||||| Sbjct 27323 GCCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCGGA 27382 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||| || | || || |||||||||||||| || ||||| ||||| || |||| || Sbjct 27383 GAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGG 27442 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||| | | ||| | || | || || | | | ||| || ||||| | Sbjct 27443 GATACCCTCCTTAT-CTTGAATCTTCGATTTGACATTGTCAATAGTATCAGAAGACTCAA 27501 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || ||||| || || || ||||| ||||| || ||||| Sbjct 27502 CCTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 27550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462298723955600