Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq355 149 6e-31
seq24 129 5e-25
seq366 122 8e-23
>seq355
Length=31638
Score = 149 bits (164), Expect = 6e-31
Identities = 151/195 (77%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||||| |||||||| | || || ||||||||||| ||||| |
Sbjct 6277 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCGAAGA 6336
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
||||||||||||| |||| ||||| || |||||| ||| ||| || ||| || |
Sbjct 6337 TCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTGT 6396
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | ||||| ||||| ||||| | || ||||| |||||||| || ||||| ||
Sbjct 6397 CG--ATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGAC 6454
Query 41851 GAAAATCTGCATGTT 41865
|||||||||||| ||
Sbjct 6455 GAAAATCTGCATCTT 6469
>seq24
Length=141979
Score = 129 bits (142), Expect = 5e-25
Identities = 140/183 (77%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| ||||| || | ||||| | || || ||||||||||| ||||| |
Sbjct 81269 CCTTCTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 81210
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
|||||||||||||||||| ||||| || ||||||||| ||| || ||| ||| |
Sbjct 81209 TCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTT-GACGTTG 81151
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | ||||| ||||| ||||||| || || || ||||||||||| ||||| |||
Sbjct 81150 TCGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 81091
Query 41852 AAA 41854
|||
Sbjct 81090 AAA 81088
>seq366
Length=80546
Score = 122 bits (134), Expect = 8e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | |||||||| || || |||||| |||||||| ||||||||
Sbjct 27323 GCCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCGGA 27382
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||| || | || || |||||||||||||| || ||||| ||||| || |||| ||
Sbjct 27383 GAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGG 27442
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | |||||| | | ||| | || | || || | | | ||| || ||||| |
Sbjct 27443 GATACCCTCCTTAT-CTTGAATCTTCGATTTGACATTGTCAATAGTATCAGAAGACTCAA 27501
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || || ||||| || || || ||||| ||||| || |||||
Sbjct 27502 CCTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 27550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462298723955600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |