Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20aotearoae_20[genbank_20GCA_5F000729855.1_202014-07-15] 2,094 sequences; 34,423,103 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq13 91.5 1e-13 >seq13 Length=187677 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| ||| || || || || |||||||| | |||||| | || | || || | Sbjct 67737 ATGCAACAGTT-GTCAAGACTTTGACTGGAAAGACCATCACCCTTGAGGTCGAGTCCTCC 67795 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | |||||| |||||| || || ||||| || ||||| ||||| Sbjct 67796 GACACCATCGACAATGTCAAATCGAAGATTCAGGATAAGGAAGGTATTCCTCCTGATCAG 67855 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | || || || || || ||||||| | | | | || |||||| || Sbjct 67856 CAGCGATTGATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGTACCCTCTCCGACTACAAT 67915 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || ||||| ||| | || || || || Sbjct 67916 ATCCAGAAGGAATCCACTCTTCACCTCGTACT 67947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478649871011680