Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20aotearoae_20[genbank_20GCA_5F000729855.1_202014-07-15] 2,094 sequences; 34,423,103 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq13 102 7e-17 >seq13 Length=187677 Score = 102 bits (112), Expect = 7e-17 Identities = 145/203 (71%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| ||| || || || || |||||||| | || ||| | || |||||| || | Sbjct 67737 ATGCAACAGTT-GTCAAGACTTTGACTGGAAAGACCATCACCCTTGAGGTCGAGTCCTCC 67795 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | |||||| |||||| || || ||||| || ||||| ||||| Sbjct 67796 GACACCATCGACAATGTCAAATCGAAGATTCAGGATAAGGAAGGTATTCCTCCTGATCAG 67855 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | || || ||||| || ||||||| | | | || ||| || || Sbjct 67856 CAGCGATTGATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGTACCCTCTCCGACTACAAT 67915 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || || || ||||| || |||| Sbjct 67916 ATCCAGAAGGAATCCACTCTTCA 67938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429925027764570