Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20aotearoae_20[genbank_20GCA_5F000729855.1_202014-07-15] 2,094 sequences; 34,423,103 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq13 86.0 4e-12 >seq13 Length=187677 Score = 86.0 bits (94), Expect = 4e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||| ||| |||| ||||||||||| || || || || ||| |||| || |||| | Sbjct 68079 ACCAGCAGCGACTCATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGAACTTTGTCCGACT 68138 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||||||||||| |||||||| ||| |||| | ||| | || || || Sbjct 68139 ACAATATTCAGAAGGAGTCTACTCTGCATTTGGTCCTGCGTCTGCGGGGTGG 68190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358115660431276