Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20aotearoae_20[genbank_20GCA_5F000729855.1_202014-07-15] 2,094 sequences; 34,423,103 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq13 96.9 1e-14 >seq13 Length=187677 Score = 96.9 bits (106), Expect = 1e-14 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 391072 TGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAAC 391131 ||||||| || || || || ||||| || || || || || | ||| || | | ||| Sbjct 67758 TGACTGGAAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTCAAAT 67817 Query 391132 AAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGA 391191 || ||||| ||||||||||| |||||||||||||| || || || || ||| | || | Sbjct 67818 CGAAGATTCAGGATAAGGAAGGTATTCCTCCTGATCAGCAGCGATTGATCTTCGCTGGTA 67877 Query 391192 AACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTC 391251 | || || |||||||| | || | | || || ||||| | ||||| | || |||| Sbjct 67878 AGCAGCTGGAAGATGGTCGTACCCTCTCCGACTACAATATCCAGAAGGAATCCACTCTTC 67937 Query 391252 ACTTAGTA 391259 || | ||| Sbjct 67938 ACCTCGTA 67945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975665392710152