Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008055.1_202015-05-15]
917 sequences; 32,918,153 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq181 111 6e-19
>seq181
Length=64741
Score = 111 bits (122), Expect = 6e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || ||||||| || |||||||| | || |||||||| ||
Sbjct 7810 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACTATTACATTGGAAGTTGAATCCTCG 7751
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || || | | || || ||||||||||||||||| ||||| ||||| ||
Sbjct 7750 GATACGATCGATAATGTAAAGTCTAAGATTCAAGATAAGGAAGGCATTCCCCCTGACCAG 7691
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || | || || | || || ||||| || ||||| |||||||| | || || |||
Sbjct 7690 CAGCGACTCATCTTTGCTGGTAAGCAACTCGAGGATGGCCGAACTTTGTCCGACTACAAT 7631
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
||| | ||||| | || || || || ||
Sbjct 7630 ATTCAGAAGGAGTCTACTCTGCATTTGGT 7602
Score = 107 bits (118), Expect = 8e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || || || || || || |||||||| || || || || |||
Sbjct 8339 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATTACTCTCGAGGTCGAGTCGTCT 8280
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||||| | | || || ||||| || ||||| |||||||| ||||| ||
Sbjct 8279 GATACTATTGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAG 8220
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| |||| ||| | || || || || || || || | ||| | | ||||| ||
Sbjct 8219 CAGCGTCTAATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGCACTCTTTCTGATTACAAC 8160
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
||| | ||||| |||||||||||
Sbjct 8159 ATTCAGAAGGAGTCAACACTTCAC 8136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975695187161036
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |