Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008055.1_202015-05-15] 917 sequences; 32,918,153 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq181 96.9 6e-15 >seq181 Length=64741 Score = 96.9 bits (106), Expect = 6e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||| | || ||||| || |||||||| || || || || || |||||| Sbjct 7355 ACCACCACGCAGACGAAGCACGAGATGCAAAGTGCTTTCCTTCTGGATGTTGTAGTCGCT 7414 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | ||| | || || | || |||||||||||||| | || || || |||||||| Sbjct 7415 CAGCGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAAATAAGTCGTTGCTGGTCAGGAGG 7474 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || || || ||||| || || |||| ||| | ||| || ||||| ||||| || || Sbjct 7475 GATGCCCTCCTTATCCTGAATCTTGGATTTGACATTGTCGATGGTATCAGAAGATTCGAC 7534 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| | || ||||| || || || | || || ||||| |||||||| Sbjct 7535 TTCCAAGGTAATAGTCTTTCCAGTCAAGGTCTTGACAAAAATTTGCAT 7582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899644087711440