Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008055.1_202015-05-15] 917 sequences; 32,918,153 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq155 87.8 1e-11 >seq155 Length=75750 Score = 87.8 bits (96), Expect = 1e-11 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 432282 TTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCT 432341 |||| || |||||||| || | |||| ||| |||||||||||||||||||| | || Sbjct 48575 TTGAAGGGCAAAGAAGGCCGACTGCGAGGCAATCTGATGGGAAAGCGTGTCGATTTTTCG 48634 Query 432342 GCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTC 432401 || ||||||||||||||| |||| | || | | ||| | ||||| || || || | | Sbjct 48635 GCCCGTACAGTTATTACTGGTGATGCCAACCTATCACTCCACGAAGTCGGCGTCCCACGC 48694 Query 432402 ATTATTGC 432409 | ||| || Sbjct 48695 AGTATCGC 48702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740585379175242