Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008065.1_202015-05-15] 2,512 sequences; 38,775,191 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3 102 2e-16 >seq3 Length=584709 Score = 102 bits (112), Expect = 2e-16 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511 ||||||||||| ||| ||| || || || ||||| || ||||| || | || ||| Sbjct 294951 GGCATGAACGCCACACTAATGAAGCAATATATTGAATTTGTCGCCGATCGTCTATTGGTT 294892 Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571 ||||||||| |||| || || ||||| | |||||||| | || |||||| |||| Sbjct 294891 GCACTTGGTAACGAAAAGGTATACAAAACCGCCAACCCCTTCGATTTCATGGAGAACATT 294832 Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631 || | || ||||| ||||||||||| ||||| || | || ||||| | | |||| Sbjct 294831 TCCTTGGGTGGCAAGACAAACTTCTTCGAGAAGCGAGTTGGAGAATATCAAAAGGCTGGC 294772 Query 230632 GTGATG 230637 || ||| Sbjct 294771 GTTATG 294766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057789953934560