Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008065.1_202015-05-15] 2,512 sequences; 38,775,191 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq9 134 1e-26 >seq9 Length=455495 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 |||||||| || ||||| || || || |||||||| |||| | ||||| | |||| || Sbjct 294758 ACTAAATGCAGAGTAGACTCCTTCTGAATATTGTAGTCGGACAAAGTTCGGCCATCCTCG 294699 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | |||||||| ||||| || | ||||| || || || ||||||||||| ||||||||| Sbjct 294698 AGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGAATGCCTTCCTTATCTTGA 294639 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || |||||| | || | || || || | ||| ||||| | || | || ||| Sbjct 294638 ATCTTAGACTTTACATTATCGATCGTATCCGAGGATTCAACTTCCAATGTAATAGTCTTG 294579 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| || || || |||||||| Sbjct 294578 CCAGTCAAAGTCTTGACGAAGATCTGCAT 294550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396266267936784