Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008065.1_202015-05-15] 2,512 sequences; 38,775,191 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 6e-12 >seq3 Length=584709 Score = 86.0 bits (94), Expect = 6e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 110729 TTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTTTAAGAAAGAATCGTTCC 110788 || || ||| |||| | ||||| || || || |||| |||| | ||| || || Sbjct 295521 TTGACAATGCCGTCAGAAGCAGCAAAGAATGCCAGAATGTGTGATATGAAGTATTTCTCG 295580 Query 110789 TTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACATGTCGATCTCTTCGACC 110848 | |||| |||| ||||||||| || | ||||||||||||| |||||||||||| || Sbjct 295581 TCGTCGCTCAGACGATTGTTCCAATCGTGCAAGTCCTTGGACAGATCGATCTCTTCGGCC 295640 Query 110849 TTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAA 110888 ||||| | | | | |||||||| ||| |||||||| Sbjct 295641 GTCCAGAAAGAGGCTTCGGCCTTCTTATACATTTGCCAAA 295680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445080424035840