Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20festucae_20[genbank_20GCA_5F002163435.1_202017-06-01] 3,769 sequences; 35,655,008 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2339 95.1 1e-14 >seq2339 Length=71557 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || |||||||| | || ||| | ||| | ||||| Sbjct 18479 ATGCAAATTTTTGTCAAGACCTTGACTGGAAAGACTATTACCTTGGAAGTGGAATCTTCT 18420 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | |||||| |||||| ||||| || || || |||||||| || Sbjct 18419 GACACCATCGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAG 18360 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| |||| |||| | ||| || || || ||||| | | | | ||||| || ||| Sbjct 18359 CAACGACTTATTTTTGCCGGAAAGCAGCTGGAAGACGGCCGCACGCTGAGCGATTACAAC 18300 Query 26949 ATTCAAAAAGAA 26960 || || || ||| Sbjct 18299 ATCCAGAAGGAA 18288 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| ||| || || || || || ||||| | |||||| | || | || || | Sbjct 18934 ATGCAACAGTT-GTCAAGACTTTGACCGGAAAGACCATCACCCTTGAGGTCGAGTCCTCC 18876 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| |||||| ||||| ||||| || ||||| ||||| Sbjct 18875 GACACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAAGGTATCCCTCCTGATCAG 18816 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | || ||||| || || ||||||| | | || |||||| || Sbjct 18815 CAGCGATTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGTACTCTCTCCGACTACAAT 18756 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || ||||||||| | || || ||||| Sbjct 18755 ATTCAGAAGGAATCTACTCTTCACCTTGTCCT 18724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478639849017680