Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20festucae_20[genbank_20GCA_5F002163435.1_202017-06-01] 3,769 sequences; 35,655,008 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq2339 100 3e-16 >seq2339 Length=71557 Score = 100 bits (110), Expect = 3e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 137220 TTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATA 137279 ||| || || |||||||||||||||| |||| |||||| || || || || ||| | Sbjct 18288 TTCCTTCTGGATGTTGTAATCGCTCAGCGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAA 18347 Query 137280 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTG 137339 || || |||||||| |||||||| ||||| || ||||| ||| || ||| | | Sbjct 18348 AATAAGTCGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGATTTGACATT 18407 Query 137340 TTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTAC 137399 || | ||||| | | ||| ||||| | || | ||||| || ||||| || || || Sbjct 18408 GTCGATGGTGTCAGAAGATTCCACTTCCAAGGTAATAGTCTTTCCAGTCAAGGTCTTGAC 18467 Query 137400 GAATATTTGCATA 137412 || ||||||||| Sbjct 18468 AAAAATTTGCATA 18480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488520983470800