Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sp._20AL9924_20[genbank_20GCA_5F000729825.1_202014-07-15] 1,068 sequences; 36,169,561 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq175 114 1e-20 >seq175 Length=62467 Score = 114 bits (126), Expect = 1e-20 Identities = 144/197 (73%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 26981 ATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGA 27040 |||| |||| ||| | | || || |||||||| |||||| | || || ||||| || || Sbjct 37889 ATACACCATCCAGTT--TCGTCAAGACTCTGACGGGCAAGACCATCACCCTTGAGGTCGA 37832 Query 27041 ACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACC 27100 | || ||| ||||||| | ||||| ||||| |||||||| || ||||| || || Sbjct 37831 GTCCTCGGACACGATTGACAATGTCAAGTCCAAAATCCAAGACAAGGAGGGCATTCCCCC 37772 Query 27101 CGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGA 27160 || || ||||| || || | ||| ||||| || | || ||| || ||| | ||||| Sbjct 37771 TGACCAGCAGCGATTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGAACCCTGTCCGA 37712 Query 27161 TTACAACATTCAAAAGG 27177 ||||||||||| |||| Sbjct 37711 CTACAACATTCAGAAGG 37695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434912593839360