Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15]
36,463 sequences; 36,098,533 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq326 86.0 5e-12
>seq326
Length=20000
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 15173 TCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTAT 15232
|| || || |||||||| ||||| || | | ||||||||| || || || || |
Sbjct 12338 TCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCTTCTAGCTGCTTTCCGGCAAAA 12397
Query 15233 ATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATT 15292
|| | ||||| |||||| || ||||| || || || ||| ||| || ||| |
Sbjct 12398 ATAAGTCGTTGCTGGTCGGGAGGGATTCCCTCCTTATCCTGAATCTTGGATTTGACAGTG 12457
Query 15293 TCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACA 15352
|| |||||||| | ||| || || ||||| || || || || |||| || || |||
Sbjct 12458 TCGATGGTATCAGCAGATTCGACTTCCAAGGTGATAGTCTTTCCAGTCAAGGTCTTGACA 12517
Query 15353 AAAATTTGCATA 15364
||||||||||||
Sbjct 12518 AAAATTTGCATA 12529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362018250166683
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |