Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_005066.1 Length=164018 Score E Sequences producing significant alignments: (Bits) Value seq20645 95.1 1e-14 >seq20645 Length=266 Score = 95.1 bits (104), Expect = 1e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 136037 ACCAGCGTTGATACCGATGCCAGCACGCTTGCTAATATACTTGATGATTGCATTTGCTGT 136096 ||| |||||||||||||| ||||| || | ||| | || || | ||| | |||||| Sbjct 34 ACCGGCGTTGATACCGATACCAGCGCGTTGGCTCACGTATTTTACGATAGATGATGCTGT 93 Query 136097 TTCGTTGATGCCCTGCAATGAGTCATCACTTTCAATCACCACGCACGAACTAAATTGTCG 136156 |||||||| | ||| || ||| |||||||| ||||| || ||||| || || Sbjct 94 CGCGTTGATGGAATCCAAGCTATCGCCACATTCAATCAGTACGCATGAGCTAAACTGACG 153 Query 136157 TGTTGGAGTACGCACACCCGCCATAATCGGAGTAGGCAGAGAGAT 136201 || || |||||||| |||||||| || || || ||||| || || Sbjct 154 AGTCGGCGTACGCACTCCCGCCATGATAGGCGTTGGCAGTGAAAT 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524490434807440