Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15]
36,463 sequences; 36,098,533 total letters
Query= NC_005284.1
Length=54865
Score E
Sequences producing significant alignments: (Bits) Value
seq22247 143 9e-30
>seq22247
Length=250
Score = 143 bits (158), Expect = 9e-30
Identities = 171/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 22358 CCTGTATCGCGTCGTTCAGCACCATCTCGAAGAGTTCGTGCGTCAGTTCAAATGGGCGCT 22417
|||||| ||||| || ||||| || || || |||||| |||| |||||| ||| ||||
Sbjct 245 CCTGTACCGCGTGGTGCAGCATCACCTGGACGAGTTCATGCGGCAGTTCCGCTGGTCGCT 186
Query 22418 GACGAGCCGGCAGGTGTTCGAGTGGCTGAAGCATACGGTCCCGGAAACCCTCACCGACAT 22477
|| ||||| ||| ||| || |||||| | | ||| || || ||||| || |||||
Sbjct 185 CACCAGCCGCCAGATGTACGCCTGGCTGCGGGAAACGAGGCCAGACACCCTTACGGACAT 126
Query 22478 CCAGCGTGCGGCACGCTTCTACTACCTGCAAAAAAGTTGCTTTGGCGGGAAGCTTGAAGG 22537
|||||| ||||| ||||||| |||||| || ||| ||| ||||| ||| | || ||
Sbjct 125 CCAGCGGGCGGCGCGCTTCTTCTACCTCCAGAAACTCGCCTTCGGCGGCAAGGTGGACGG 66
Query 22538 GCAGACGTTCGGAACGGCGACGACTACGGTGCCGGGCCTGAACCTGCTGCGC 22589
||||| | ||| ||| | || || | | | |||||||||||||||||
Sbjct 65 CCAGACCTACGGCACGTCCACCACGGCCCCGATGCGCCTGAACCTGCTGCGC 14
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 175370432037762
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |