Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_009821.1 Length=164270 Score E Sequences producing significant alignments: (Bits) Value seq20645 89.7 5e-13 >seq20645 Length=266 Score = 89.7 bits (98), Expect = 5e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 136045 CCAGCGTTGATACCGATACCAGCACGCTTGCTAATATACTTGATGATTGCATTTGCTGTT 136104 || |||||||||||||||||||| || | ||| | || || | ||| | |||||| Sbjct 35 CCGGCGTTGATACCGATACCAGCGCGTTGGCTCACGTATTTTACGATAGATGATGCTGTC 94 Query 136105 TCGTTGATGCCCTGCAATGAGTCATCACTTTCAATCACCACACACGAACTAAATTGGCGT 136164 |||||||| | ||| || ||| |||||||| || || || ||||| || || Sbjct 95 GCGTTGATGGAATCCAAGCTATCGCCACATTCAATCAGTACGCATGAGCTAAACTGACGA 154 Query 136165 GTTGGGGTACGCACACCTGCCATAATCGGAGTAGGCAGAGAGAT 136208 || || |||||||| || ||||| || || || ||||| || || Sbjct 155 GTCGGCGTACGCACTCCCGCCATGATAGGCGTTGGCAGTGAAAT 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525296467260400