Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq22852 84.2 1e-11 >seq22852 Length=248 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 66147 CAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAG 66206 ||||| ||||||||||||||||| |||||||| || ||| || || || |||| Sbjct 202 CAGCCCGACACTGGCGAGCAGGCGCTGGAGATTGTGGACAGCCTGGTGCGCTCGGGCGCT 143 Query 66207 GTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGG 66266 || | ||||| |||||||| ||||| || || || ||| || ||||||| Sbjct 142 GTGGATCTAATCGTGGTGGACTCGGTGGCTGCGCTCACCCCCAAGGCCGAAATCGAAGGC 83 Query 66267 GACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAG 66326 || || || || | | |||||||| |||||||||||| | ||| ||||| || Sbjct 82 GAAATGGGCGATGCCCTGCCCGGCCTGCCGGCCCGCCTGATGAGCCCGGCGCTGCGCCAG 23 Query 66327 CTGACCGGCACGAT 66340 || | | |||||| Sbjct 22 CTCCCGGCCACGAT 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242362647896996