Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq20645 111 2e-19 >seq20645 Length=266 Score = 111 bits (122), Expect = 2e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 129298 GCACGAATCGCACCGCCGTTGATGCCGATACCAGCGCGTTTGCTGATATAGTCAACGATA 129357 ||||| || |||| ||||||| |||||||||||||||| ||| | || | |||||| Sbjct 23 GCACGGATACGACCGGCGTTGATACCGATACCAGCGCGTTGGCTCACGTATTTTACGATA 82 Query 129358 GAACTAGCGGTAGCGTTGATGCTATCCAGTTCGTCTCCACATTCGATCTTGACACAAGAG 129417 || || || ||||||||| ||||| || |||||||| ||| || || ||| Sbjct 83 GATGATGCTGTCGCGTTGATGGAATCCAAGCTATCGCCACATTCAATCAGTACGCATGAG 142 Query 129418 CTAAACTGCCGAGTCGGGGTGCGAACACCTGCGAGAATCGGAGTTGGCAGACTCAGCTTG 129477 |||||||| |||||||| || || || || || | || || |||||||| | ||| Sbjct 143 CTAAACTGACGAGTCGGCGTACGCACTCCCGCCATGATAGGCGTTGGCAGTGAAATCTTA 202 Query 129478 CCAAGCGATGTTACGTCATAGAAGTTTTTGACTTTTTGCAG 129518 | |||| |||| || || | |||||| | |||||| Sbjct 203 AAAGTCGATACCGCGTCGTAAAAATCTTTGACGTATTGCAG 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720401100457440