Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq20645 95.1 1e-14 >seq20645 Length=266 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 138131 TGCACGAATCATACCTGCGTTAATGCCGATACCAGCACGTTTAGAGATGTACTCTACAAT 138190 |||||| || ||| ||||| || ||||||||||| |||| | ||| | ||| || Sbjct 22 TGCACGGATACGACCGGCGTTGATACCGATACCAGCGCGTTGGCTCACGTATTTTACGAT 81 Query 138191 TGATTCAGCTGATTTGTTAATTGACTTCAGTGAATCACCAGCTTCAATAACAACGCAAGA 138250 ||| |||| ||| || || | || ||| ||| |||||| | ||||| || Sbjct 82 AGATGATGCTGTCGCGTTGATGGAATCCAAGCTATCGCCACATTCAATCAGTACGCATGA 141 Query 138251 ACTGAATTGACGAGTAGGAGTACGAGCACCTGCCATGATTGGAGTTGGCAGAGAAATTTT 138310 || || |||||||| || ||||| | || |||||||| || |||||||| ||||| || Sbjct 142 GCTAAACTGACGAGTCGGCGTACGCACTCCCGCCATGATAGGCGTTGGCAGTGAAATCTT 201 Query 138311 CTTAGTTGACACAGCATCATAAAAA 138335 ||| || || || || |||||| Sbjct 202 AAAAGTCGATACCGCGTCGTAAAAA 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529358614940000