Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_014663.1 Length=169947 Score E Sequences producing significant alignments: (Bits) Value seq20645 104 3e-17 >seq20645 Length=266 Score = 104 bits (114), Expect = 3e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 148001 TGATGCCAATACCTGCTCGTTTAGACACATATTTTACAATAGCTGATGTGGTTTCAGTAA 148060 |||| || ||||| || |||| ||| |||||||| |||| ||||| || | | | Sbjct 42 TGATACCGATACCAGCGCGTTGGCTCACGTATTTTACGATAGATGATGCTGTCGCGTTGA 101 Query 148061 TTGATTCTAAATCGTCGCCAGTTTCAATCAATACACACGAACTGAATTGACGTGTTGGAG 148120 | || || || |||||| |||||||| ||| || || || || ||||| || || | Sbjct 102 TGGAATCCAAGCTATCGCCACATTCAATCAGTACGCATGAGCTAAACTGACGAGTCGGCG 161 Query 148121 TCCGGACACCTGCAAGAATAGGAGTTGGCAAACTAATTTTGAATTGCGATGCAGCATCAT 148180 | || || || || | ||||| ||||||| ||| || || |||| | || || | Sbjct 162 TACGCACTCCCGCCATGATAGGCGTTGGCAGTGAAATCTTAAAAGTCGATACCGCGTCGT 221 Query 148181 AAAAATCTTTGATGTATTGCAAACG 148205 |||||||||||| |||||||| ||| Sbjct 222 AAAAATCTTTGACGTATTGCAGACG 246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543454587242360