Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq25565 100 1e-16 >seq25565 Length=235 Score = 100 bits (110), Expect = 1e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 9973 GTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCCG 10032 || || || |||||| | ||||||| | |||| || || || |||||||| || || Sbjct 214 GTGAATAAGGTCATCTTGATCGGCAACGTGGGCGGTGATCCCGAGACCCGCTATCTGCCC 155 Query 10033 AGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTACAAGGACAAGGCG 10092 | ||| |||| | |||||||| || || || ||||| ||| ||||||||| | Sbjct 154 AATGGCAACGCGGTGACCAACATCACGCTTGCAACCACCGACAGCTGGAAGGACAAGCAG 95 Query 10093 AGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGTCAGCTTCTTCGGCCGCCTCGCC 10152 | | || | | ||||| |||||||||||||| ||| | |||||| | ||| Sbjct 94 ACCAGCCTGCTCCAGGAACGCACCGAATGGCACCGTGTCGTTCTGTTCGGCAAAGTAGCC 35 Query 10153 GAGATCGTCGACGAGTACCTGCGCAAGG 10180 ||||||| || |||||||| ||||| || Sbjct 34 GAGATCGCCGGCGAGTACCGGCGCAGGG 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197703157820454