Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_019925.1 Length=152427 Score E Sequences producing significant alignments: (Bits) Value seq20645 89.7 5e-13 >seq20645 Length=266 Score = 89.7 bits (98), Expect = 5e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 51633 CACGGATTGCCCCGAAGTCGAAACCGATACCAGCGCGTTTTGACACATAGTCAACGATGG 51692 ||||||| ||| || || ||||||||||||||||| ||| || | ||||| | Sbjct 24 CACGGATACGACCGGCGTTGATACCGATACCAGCGCGTTGGCTCACGTATTTTACGATAG 83 Query 51693 TCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTCTTGATCAACACACATGAGC 51752 || || |||||||| || |||| | | || ||| | |||| || ||||||| Sbjct 84 ATGATGCTGTCGCGTTGATGGAATCCAAGCTATCGCCACATTCAATCAGTACGCATGAGC 143 Query 51753 TGAACTGACGGGTAGGAGTACGAACACCGGCCATGATCGGGGTTGGAAG 51801 | |||||||| || || ||||| || || |||||||| || ||||| || Sbjct 144 TAAACTGACGAGTCGGCGTACGCACTCCCGCCATGATAGGCGTTGGCAG 192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487416140512760