Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq20645 120 2e-22 >seq20645 Length=266 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 9196 GCGACTACAATACATCAAAGAATTCTATGATGCAGCGAGCACATTTGAAATCTCCCTCCC 9255 ||| || |||||| ||||||| || || || || | || ||| | || || || || Sbjct 247 GCGTCTGCAATACGTCAAAGATTTTTACGACGCGGTATCGACTTTTAAGATTTCACTGCC 188 Query 9256 GACACCAATCATGTCTGGTGTTCGTACACCGACCCGCCAATTCAGCTCATGCGTAAAAAT 9315 || || |||||| | || || ||||| ||||| || || || |||||||||||| || Sbjct 187 AACGCCTATCATGGCGGGAGTGCGTACGCCGACTCGTCAGTTTAGCTCATGCGTACTGAT 128 Query 9316 CGAAAGCGGTGATAGCCTAAAATCAATCAATGCAACATCAGGCGCAATCGTGAGTTACGT 9375 ||| | || |||||| | | || ||||| || ||| || | ||||| | ||||| Sbjct 127 TGAATGTGGCGATAGCTTGGATTCCATCAACGCGACAGCATCATCTATCGTAAAATACGT 68 Query 9376 TTCACAGCGTGCAGGTATTGGCATTAACGCGGGTCGTATCCGAGCATTAGG 9426 || || || ||||| || || ||||| ||||||||||| |||||||| Sbjct 67 GAGCCAACGCGCTGGTATCGGTATCAACGCCGGTCGTATCCGTGCATTAGG 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342820385352797