Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_021344.2 Length=176227 Score E Sequences producing significant alignments: (Bits) Value seq20645 93.3 5e-14 >seq20645 Length=266 Score = 93.3 bits (102), Expect = 5e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 41615 GATTTCTACAACGCAATTTCGGATCGTAAGCTGTCGTTACCTACGCCTATTATGGCTGGT 41674 ||||| ||| |||| | ||| | |||| | || | || |||||||| ||||| || Sbjct 228 GATTTTTACGACGCGGTATCGACTTTTAAGATTTCACTGCCAACGCCTATCATGGCGGGA 169 Query 41675 GTGCGTACTCCTACGCGTCAGTTTTCCAGTTGCGTAGTGATTGAATCAGGTGATTCACTG 41734 |||||||| || || ||||||||| | |||||| ||||||||| || ||| || Sbjct 168 GTGCGTACGCCGACTCGTCAGTTTAGCTCATGCGTACTGATTGAATGTGGCGATAGCTTG 109 Query 41735 GGTTCTCTGAATGCTGTAACCTCTGCGATCGTGAAGTATATTTCACAACGTGCTGGTATC 41794 | ||| | || || | | || | ||||| || || | ||||| ||||||||| Sbjct 108 GATTCCATCAACGCGACAGCATCATCTATCGTAAAATACGTGAGCCAACGCGCTGGTATC 49 Query 41795 GGTGTAAACGCCGGACATATTCGCGC 41820 ||| | |||||||| | ||| || || Sbjct 48 GGTATCAACGCCGGTCGTATCCGTGC 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563541427736760