Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_021529.2 Length=247511 Score E Sequences producing significant alignments: (Bits) Value seq20645 91.5 2e-13 >seq20645 Length=266 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 63648 TTTTACAACGCTGTATCAAATCAGAAACTTTCTTTACCAACCCCGATCATGGCAGGTGTT 63707 |||||| |||| ||||| | | || |||| | ||||| || |||||||| || || Sbjct 225 TTTTACGACGCGGTATCGACTTTTAAGATTTCACTGCCAACGCCTATCATGGCGGGAGTG 166 Query 63708 CGTACGCCAACTCGACAATTTAGCTCATGTGTTAAAATCGAATCTGGCGACTCTCTGCAT 63767 |||||||| ||||| || ||||||||||| || || |||| |||||| || || Sbjct 165 CGTACGCCGACTCGTCAGTTTAGCTCATGCGTACTGATTGAATGTGGCGATAGCTTGGAT 106 Query 63768 TCAGTCAACAAAGTAGCCGAAGCAATCATCAACTATATCAGTAAACGTGCTGGTATCGGT 63827 || ||||| ||| | | ||| | || || | || |||| |||||||||||| Sbjct 105 TCCATCAACGCGACAGCATCATCTATCGTAAAATACGTGAGCCAACGCGCTGGTATCGGT 46 Query 63828 GTTAATGGCGGTGCTATTCGTGC 63850 | || | |||| ||| ||||| Sbjct 45 ATCAACGCCGGTCGTATCCGTGC 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 791546258597080