Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq20645 91.5 2e-13 >seq20645 Length=266 Score = 91.5 bits (100), Expect = 2e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 146173 TGCACGAATCATACCTGCGTTAATGCCGATACCAGCACGTTTAGAGATGTACTCTACAAT 146232 |||||| || ||| ||||| || ||||||||||| |||| | ||| | ||| || Sbjct 22 TGCACGGATACGACCGGCGTTGATACCGATACCAGCGCGTTGGCTCACGTATTTTACGAT 81 Query 146233 TGATTCAGCAGATTTGTTAATTGATTTCAGTGAATCACCAGCTTCAATAACAACGCAAGA 146292 ||| || | ||| || || | || ||| ||| |||||| | ||||| || Sbjct 82 AGATGATGCTGTCGCGTTGATGGAATCCAAGCTATCGCCACATTCAATCAGTACGCATGA 141 Query 146293 ACTGAATTGACGAGTAGGAGTACGAGCACCTGCCATAATAGGAGTAGGCAGAGAAATTTT 146352 || || |||||||| || ||||| | || ||||| ||||| || ||||| ||||| || Sbjct 142 GCTAAACTGACGAGTCGGCGTACGCACTCCCGCCATGATAGGCGTTGGCAGTGAAATCTT 201 Query 146353 CTTAGTTGACACAGCATCGTaaaaa 146377 ||| || || || ||||||||| Sbjct 202 AAAAGTCGATACCGCGTCGTAAAAA 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554102531829280