Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq25565 185 3e-42 >seq25565 Length=235 Score = 185 bits (204), Expect = 3e-42 Identities = 159/197 (81%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 30194 CCGACGATCTCCGCCAACTTCCCGAAGAACACCACGCGGTGCCATTCGGTGCGCTCCTGT 30253 ||| ||||||| || | || ||||| | || || ||||||||||||||||| ||||| Sbjct 24 CCGGCGATCTCGGCTACTTTGCCGAACAGAACGACACGGTGCCATTCGGTGCGTTCCTGG 83 Query 30254 TGCTGGCCGGTCTGCTTGTCCTTCCAGCTCTCGCTGGTGGCGAGGGTGATGTTGGTCACC 30313 || ||| ||||||||||||||||||||| ||| |||| || || ||||||||||||||| Sbjct 84 AGCAGGCTGGTCTGCTTGTCCTTCCAGCTGTCGGTGGTTGCAAGCGTGATGTTGGTCACC 143 Query 30314 GCATTGCCGTTGGGCATATAGCGAGTTTCCGGGTCACCACCGACGTTGCCAACCAGAATG 30373 || ||||| ||||||| |||||| || || || ||||| || |||||||| | || ||| Sbjct 144 GCGTTGCCATTGGGCAGATAGCGGGTCTCGGGATCACCGCCCACGTTGCCGATCAAGATG 203 Query 30374 ACTTTGTTAACGCCTCT 30390 || || || || ||||| Sbjct 204 ACCTTATTCACCCCTCT 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145575338845872