Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_025414.1 Length=178171 Score E Sequences producing significant alignments: (Bits) Value seq20645 87.8 2e-12 >seq20645 Length=266 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41141 GATTTCTACAACGCAATTTCGGATCGTAAGCTGTCGTTACCTACGCCTATTATGGCTGGT 41200 ||||| ||| |||| | ||| | |||| | || | || |||||||| ||||| || Sbjct 228 GATTTTTACGACGCGGTATCGACTTTTAAGATTTCACTGCCAACGCCTATCATGGCGGGA 169 Query 41201 GTGCGTACTCCTACGCGTCAGTTTTCCAGTTGCGTAGTGATTGAATCAGGTGATTCCCTG 41260 |||||||| || || ||||||||| | |||||| ||||||||| || ||| | || Sbjct 168 GTGCGTACGCCGACTCGTCAGTTTAGCTCATGCGTACTGATTGAATGTGGCGATAGCTTG 109 Query 41261 GGTTCTCTGAATGCTGTAACCTCTGCGATCGTGAAGTATATTTCACAACGTGCTGGTATC 41320 | ||| | || || | | || | ||||| || || | ||||| ||||||||| Sbjct 108 GATTCCATCAACGCGACAGCATCATCTATCGTAAAATACGTGAGCCAACGCGCTGGTATC 49 Query 41321 GGTGTTAATGCTGGACACATTCGCGCAATGGGTTCTAAAATCCGTGGT 41368 ||| | || || || | || || ||| | || |||||||||| Sbjct 48 GGTATCAACGCCGGTCGTATCCGTGCATTAGGAAGCCCAATCCGTGGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569759392373880