Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_025428.1 Length=59601 Score E Sequences producing significant alignments: (Bits) Value seq24664 87.8 7e-13 >seq24664 Length=239 Score = 87.8 bits (96), Expect = 7e-13 Identities = 93/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 10760 TCATCGAGCGCGTCGAGCGCCTGGAGGTCGAGAAGAAGGACATCGCGGACCAGGTGAAGG 10819 || |||||||| | || |||||||||| || ||| ||| | || | | | |||||| Sbjct 8 TCGTCGAGCGCCTGGAACGCCTGGAGGAGGACAAGCAGGCCGTCATGACCGACATGAAGG 67 Query 10820 AGGTCCTGGCCGAGGCCAAGGCGCG-GGGCTACGACACCAAGGTCATGCGCAAGATCATC 10878 ||||| | |||||||| |||| ||| |||||||||| |||| || |||||||| ||||| Sbjct 68 AGGTCTTCGCCGAGGCTAAGG-GCGAGGGCTACGACGTCAAGATCCTGCGCAAGGTCATC 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190519069864578