Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_025452.1 Length=155346 Score E Sequences producing significant alignments: (Bits) Value seq20645 89.7 5e-13 >seq20645 Length=266 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 27133 ACCGATACCAGCGCGTTTGGACACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGA 27192 ||||||||||||||||| | ||| || | ||||| | || || |||||||| || Sbjct 46 ACCGATACCAGCGCGTTGGCTCACGTATTTTACGATAGATGATGCTGTCGCGTTGATGGA 105 Query 27193 GTCCAGGGTGTCACCAGTCTTGATCAACACACATGAGCTGAACTGACGGGTAGGAGTACG 27252 |||| | | || ||| | |||| || |||||||| |||||||| || || ||||| Sbjct 106 ATCCAAGCTATCGCCACATTCAATCAGTACGCATGAGCTAAACTGACGAGTCGGCGTACG 165 Query 27253 AACACCGGCCATGATCGGGGTTGGAAG 27279 || || |||||||| || ||||| || Sbjct 166 CACTCCCGCCATGATAGGCGTTGGCAG 192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496752683092880